Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC37.1■■■■□ 3.53
PCDH11XQ9BZA7 AP006261.1-201ENST00000584783 668 ntBASIC37.07■■■■□ 3.52
PCDH11XQ9BZA7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC37.07■■■■□ 3.52
PCDH11XQ9BZA7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
PCDH11XQ9BZA7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC37.06■■■■□ 3.52
PCDH11XQ9BZA7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC37.06■■■■□ 3.52
PCDH11XQ9BZA7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC37.06■■■■□ 3.52
PCDH11XQ9BZA7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
PCDH11XQ9BZA7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
PCDH11XQ9BZA7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC36.95■■■■□ 3.51
PCDH11XQ9BZA7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC36.94■■■■□ 3.5
PCDH11XQ9BZA7 HNRNPLP2-201ENST00000568980 1570 ntBASIC36.94■■■■□ 3.5
PCDH11XQ9BZA7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
PCDH11XQ9BZA7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
PCDH11XQ9BZA7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC36.88■■■■□ 3.49
PCDH11XQ9BZA7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
PCDH11XQ9BZA7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC36.87■■■■□ 3.49
PCDH11XQ9BZA7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC36.87■■■■□ 3.49
PCDH11XQ9BZA7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC36.85■■■■□ 3.49
PCDH11XQ9BZA7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
PCDH11XQ9BZA7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC36.83■■■■□ 3.49
PCDH11XQ9BZA7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
PCDH11XQ9BZA7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC36.82■■■■□ 3.49
PCDH11XQ9BZA7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC36.82■■■■□ 3.48
PCDH11XQ9BZA7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC36.82■■■■□ 3.48
PCDH11XQ9BZA7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
PCDH11XQ9BZA7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC36.78■■■■□ 3.48
PCDH11XQ9BZA7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
PCDH11XQ9BZA7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
PCDH11XQ9BZA7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC36.77■■■■□ 3.48
PCDH11XQ9BZA7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
PCDH11XQ9BZA7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC36.76■■■■□ 3.48
PCDH11XQ9BZA7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.47
PCDH11XQ9BZA7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC36.75■■■■□ 3.47
PCDH11XQ9BZA7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC36.75■■■■□ 3.47
PCDH11XQ9BZA7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
PCDH11XQ9BZA7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC36.73■■■■□ 3.47
PCDH11XQ9BZA7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC36.73■■■■□ 3.47
PCDH11XQ9BZA7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC36.73■■■■□ 3.47
PCDH11XQ9BZA7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC36.71■■■■□ 3.47
PCDH11XQ9BZA7 MIR3665-201ENST00000578708 105 ntBASIC36.71■■■■□ 3.47
PCDH11XQ9BZA7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
PCDH11XQ9BZA7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC36.69■■■■□ 3.46
PCDH11XQ9BZA7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC36.67■■■■□ 3.46
PCDH11XQ9BZA7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
PCDH11XQ9BZA7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
PCDH11XQ9BZA7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
PCDH11XQ9BZA7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC36.62■■■■□ 3.45
PCDH11XQ9BZA7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
PCDH11XQ9BZA7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC36.61■■■■□ 3.45
PCDH11XQ9BZA7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
PCDH11XQ9BZA7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
PCDH11XQ9BZA7 DUX4L28-201ENST00000623687 678 ntBASIC36.59■■■■□ 3.45
PCDH11XQ9BZA7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
PCDH11XQ9BZA7 AC087741.3-201ENST00000624270 1347 ntBASIC36.57■■■■□ 3.44
PCDH11XQ9BZA7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC36.57■■■■□ 3.44
PCDH11XQ9BZA7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
PCDH11XQ9BZA7 CHML-205ENST00000638160 705 ntTSL 3 BASIC36.54■■■■□ 3.44
PCDH11XQ9BZA7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
PCDH11XQ9BZA7 MIR762-201ENST00000390236 83 ntBASIC36.52■■■■□ 3.44
PCDH11XQ9BZA7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC36.5■■■■□ 3.43
PCDH11XQ9BZA7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
PCDH11XQ9BZA7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC36.49■■■■□ 3.43
PCDH11XQ9BZA7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC36.49■■■■□ 3.43
PCDH11XQ9BZA7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
PCDH11XQ9BZA7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC36.44■■■■□ 3.42
PCDH11XQ9BZA7 ABHD17AP4-201ENST00000411545 909 ntBASIC36.43■■■■□ 3.42
PCDH11XQ9BZA7 AC005559.1-201ENST00000589661 871 ntBASIC36.43■■■■□ 3.42
PCDH11XQ9BZA7 AC044849.2-201ENST00000606596 710 ntBASIC36.42■■■■□ 3.42
PCDH11XQ9BZA7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
PCDH11XQ9BZA7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC36.41■■■■□ 3.42
PCDH11XQ9BZA7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC36.4■■■■□ 3.42
PCDH11XQ9BZA7 MIR7108-201ENST00000614319 87 ntBASIC36.39■■■■□ 3.42
PCDH11XQ9BZA7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC36.39■■■■□ 3.42
PCDH11XQ9BZA7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC36.38■■■■□ 3.42
PCDH11XQ9BZA7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
PCDH11XQ9BZA7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC36.37■■■■□ 3.41
PCDH11XQ9BZA7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC36.36■■■■□ 3.41
PCDH11XQ9BZA7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC36.36■■■■□ 3.41
PCDH11XQ9BZA7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
PCDH11XQ9BZA7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
PCDH11XQ9BZA7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC36.33■■■■□ 3.41
PCDH11XQ9BZA7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC36.32■■■■□ 3.4
PCDH11XQ9BZA7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC36.32■■■■□ 3.4
PCDH11XQ9BZA7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC36.31■■■■□ 3.4
PCDH11XQ9BZA7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
PCDH11XQ9BZA7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC36.29■■■■□ 3.4
PCDH11XQ9BZA7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC36.26■■■■□ 3.4
PCDH11XQ9BZA7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC36.26■■■■□ 3.39
PCDH11XQ9BZA7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC36.22■■■■□ 3.39
PCDH11XQ9BZA7 WASH5P-204ENST00000632292 975 ntBASIC36.21■■■■□ 3.39
PCDH11XQ9BZA7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC36.19■■■■□ 3.38
PCDH11XQ9BZA7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
PCDH11XQ9BZA7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC36.18■■■■□ 3.38
PCDH11XQ9BZA7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC36.17■■■■□ 3.38
PCDH11XQ9BZA7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC36.17■■■■□ 3.38
PCDH11XQ9BZA7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC36.17■■■■□ 3.38
PCDH11XQ9BZA7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC36.17■■■■□ 3.38
PCDH11XQ9BZA7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC36.17■■■■□ 3.38
PCDH11XQ9BZA7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC36.12■■■■□ 3.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms