Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC36.55■■■■□ 3.44
TUBGCP6Q96RT7 MIR7108-201ENST00000614319 87 ntBASIC36.55■■■■□ 3.44
TUBGCP6Q96RT7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
TUBGCP6Q96RT7 AL133380.1-201ENST00000506013 324 ntBASIC36.54■■■■□ 3.44
TUBGCP6Q96RT7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
TUBGCP6Q96RT7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC36.53■■■■□ 3.44
TUBGCP6Q96RT7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC36.48■■■■□ 3.43
TUBGCP6Q96RT7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC36.48■■■■□ 3.43
TUBGCP6Q96RT7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
TUBGCP6Q96RT7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC36.47■■■■□ 3.43
TUBGCP6Q96RT7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
TUBGCP6Q96RT7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
TUBGCP6Q96RT7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
TUBGCP6Q96RT7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
TUBGCP6Q96RT7 HLA-V-202ENST00000446817 847 ntBASIC36.44■■■■□ 3.42
TUBGCP6Q96RT7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC36.43■■■■□ 3.42
TUBGCP6Q96RT7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
TUBGCP6Q96RT7 MVK-208ENST00000539696 608 ntTSL 5 BASIC36.41■■■■□ 3.42
TUBGCP6Q96RT7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC36.4■■■■□ 3.42
TUBGCP6Q96RT7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
TUBGCP6Q96RT7 DUX4L28-201ENST00000623687 678 ntBASIC36.38■■■■□ 3.42
TUBGCP6Q96RT7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
TUBGCP6Q96RT7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC36.37■■■■□ 3.41
TUBGCP6Q96RT7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC36.36■■■■□ 3.41
TUBGCP6Q96RT7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC36.34■■■■□ 3.41
TUBGCP6Q96RT7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC36.34■■■■□ 3.41
TUBGCP6Q96RT7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
TUBGCP6Q96RT7 ABHD17AP4-201ENST00000411545 909 ntBASIC36.33■■■■□ 3.41
TUBGCP6Q96RT7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC36.32■■■■□ 3.41
TUBGCP6Q96RT7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC36.32■■■■□ 3.4
TUBGCP6Q96RT7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC36.32■■■■□ 3.4
TUBGCP6Q96RT7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC36.31■■■■□ 3.4
TUBGCP6Q96RT7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC36.29■■■■□ 3.4
TUBGCP6Q96RT7 AC087741.3-201ENST00000624270 1347 ntBASIC36.28■■■■□ 3.4
TUBGCP6Q96RT7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC36.28■■■■□ 3.4
TUBGCP6Q96RT7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
TUBGCP6Q96RT7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
TUBGCP6Q96RT7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC36.27■■■■□ 3.4
TUBGCP6Q96RT7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC36.27■■■■□ 3.4
TUBGCP6Q96RT7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC36.26■■■■□ 3.39
TUBGCP6Q96RT7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
TUBGCP6Q96RT7 MIR3665-201ENST00000578708 105 ntBASIC36.24■■■■□ 3.39
TUBGCP6Q96RT7 AC044849.2-201ENST00000606596 710 ntBASIC36.22■■■■□ 3.39
TUBGCP6Q96RT7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC36.22■■■■□ 3.39
TUBGCP6Q96RT7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC36.21■■■■□ 3.39
TUBGCP6Q96RT7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
TUBGCP6Q96RT7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC36.19■■■■□ 3.38
TUBGCP6Q96RT7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC36.18■■■■□ 3.38
TUBGCP6Q96RT7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
TUBGCP6Q96RT7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC36.13■■■■□ 3.37
TUBGCP6Q96RT7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC36.13■■■■□ 3.37
TUBGCP6Q96RT7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC36.13■■■■□ 3.37
TUBGCP6Q96RT7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC36.1■■■■□ 3.37
TUBGCP6Q96RT7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
TUBGCP6Q96RT7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC36.08■■■■□ 3.37
TUBGCP6Q96RT7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC36.06■■■■□ 3.36
TUBGCP6Q96RT7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC36.04■■■■□ 3.36
TUBGCP6Q96RT7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
TUBGCP6Q96RT7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC36.02■■■■□ 3.36
TUBGCP6Q96RT7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC36.02■■■■□ 3.36
TUBGCP6Q96RT7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC36■■■■□ 3.35
TUBGCP6Q96RT7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
TUBGCP6Q96RT7 AC005559.1-201ENST00000589661 871 ntBASIC35.98■■■■□ 3.35
TUBGCP6Q96RT7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC35.97■■■■□ 3.35
TUBGCP6Q96RT7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
TUBGCP6Q96RT7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
TUBGCP6Q96RT7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC35.94■■■■□ 3.34
TUBGCP6Q96RT7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC35.93■■■■□ 3.34
TUBGCP6Q96RT7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC35.93■■■■□ 3.34
TUBGCP6Q96RT7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
TUBGCP6Q96RT7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
TUBGCP6Q96RT7 MIR762-201ENST00000390236 83 ntBASIC35.9■■■■□ 3.34
TUBGCP6Q96RT7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC35.9■■■■□ 3.34
TUBGCP6Q96RT7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
TUBGCP6Q96RT7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC35.89■■■■□ 3.34
TUBGCP6Q96RT7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC35.87■■■■□ 3.33
TUBGCP6Q96RT7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC35.87■■■■□ 3.33
TUBGCP6Q96RT7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC35.87■■■■□ 3.33
TUBGCP6Q96RT7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
TUBGCP6Q96RT7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
TUBGCP6Q96RT7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
TUBGCP6Q96RT7 CHML-205ENST00000638160 705 ntTSL 3 BASIC35.84■■■■□ 3.33
TUBGCP6Q96RT7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC35.81■■■■□ 3.32
TUBGCP6Q96RT7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
TUBGCP6Q96RT7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC35.8■■■■□ 3.32
TUBGCP6Q96RT7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC35.8■■■■□ 3.32
TUBGCP6Q96RT7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
TUBGCP6Q96RT7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC35.76■■■■□ 3.31
TUBGCP6Q96RT7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
TUBGCP6Q96RT7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC35.73■■■■□ 3.31
TUBGCP6Q96RT7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
TUBGCP6Q96RT7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
TUBGCP6Q96RT7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC35.7■■■■□ 3.31
TUBGCP6Q96RT7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.69■■■■□ 3.3
TUBGCP6Q96RT7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC35.69■■■■□ 3.3
TUBGCP6Q96RT7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
TUBGCP6Q96RT7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC35.67■■■■□ 3.3
TUBGCP6Q96RT7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC35.67■■■■□ 3.3
TUBGCP6Q96RT7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
TUBGCP6Q96RT7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC35.66■■■■□ 3.3
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms