Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMCN2Q8NDA2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.63■□□□□ 0.25
HMCN2Q8NDA2 MIR4449-201ENST00000578365 66 ntBASIC16.63■□□□□ 0.25
HMCN2Q8NDA2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMCN2Q8NDA2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HMCN2Q8NDA2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.6■□□□□ 0.25
HMCN2Q8NDA2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.6■□□□□ 0.25
HMCN2Q8NDA2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMCN2Q8NDA2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMCN2Q8NDA2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HMCN2Q8NDA2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMCN2Q8NDA2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
HMCN2Q8NDA2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMCN2Q8NDA2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC16.53■□□□□ 0.24
HMCN2Q8NDA2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.52■□□□□ 0.24
HMCN2Q8NDA2 DUX4L28-201ENST00000623687 678 ntBASIC16.51■□□□□ 0.23
HMCN2Q8NDA2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.51■□□□□ 0.23
HMCN2Q8NDA2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HMCN2Q8NDA2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HMCN2Q8NDA2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HMCN2Q8NDA2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.5■□□□□ 0.23
HMCN2Q8NDA2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.5■□□□□ 0.23
HMCN2Q8NDA2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMCN2Q8NDA2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMCN2Q8NDA2 MIR639-201ENST00000384974 98 ntBASIC16.46■□□□□ 0.23
HMCN2Q8NDA2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HMCN2Q8NDA2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.46■□□□□ 0.22
HMCN2Q8NDA2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HMCN2Q8NDA2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.42■□□□□ 0.22
HMCN2Q8NDA2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMCN2Q8NDA2 ZNRF2P2-203ENST00000454624 420 ntBASIC16.42■□□□□ 0.22
HMCN2Q8NDA2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMCN2Q8NDA2 MIR762-201ENST00000390236 83 ntBASIC16.39■□□□□ 0.21
HMCN2Q8NDA2 AC044849.2-201ENST00000606596 710 ntBASIC16.39■□□□□ 0.21
HMCN2Q8NDA2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HMCN2Q8NDA2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC16.38■□□□□ 0.21
HMCN2Q8NDA2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.37■□□□□ 0.21
HMCN2Q8NDA2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.37■□□□□ 0.21
HMCN2Q8NDA2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.35■□□□□ 0.21
HMCN2Q8NDA2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMCN2Q8NDA2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC16.34■□□□□ 0.21
HMCN2Q8NDA2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMCN2Q8NDA2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HMCN2Q8NDA2 AL133380.1-201ENST00000506013 324 ntBASIC16.33■□□□□ 0.2
HMCN2Q8NDA2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.33■□□□□ 0.2
HMCN2Q8NDA2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.32■□□□□ 0.2
HMCN2Q8NDA2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMCN2Q8NDA2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.31■□□□□ 0.2
HMCN2Q8NDA2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMCN2Q8NDA2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMCN2Q8NDA2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMCN2Q8NDA2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.3■□□□□ 0.2
HMCN2Q8NDA2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC16.29■□□□□ 0.2
HMCN2Q8NDA2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMCN2Q8NDA2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HMCN2Q8NDA2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMCN2Q8NDA2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMCN2Q8NDA2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMCN2Q8NDA2 AC005559.1-201ENST00000589661 871 ntBASIC16.25■□□□□ 0.19
HMCN2Q8NDA2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.25■□□□□ 0.19
HMCN2Q8NDA2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HMCN2Q8NDA2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMCN2Q8NDA2 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.24■□□□□ 0.19
HMCN2Q8NDA2 AC145285.7-201ENST00000614819 1539 ntBASIC16.24■□□□□ 0.19
HMCN2Q8NDA2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMCN2Q8NDA2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.24■□□□□ 0.19
HMCN2Q8NDA2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMCN2Q8NDA2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMCN2Q8NDA2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HMCN2Q8NDA2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HMCN2Q8NDA2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.2■□□□□ 0.18
HMCN2Q8NDA2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.19■□□□□ 0.18
HMCN2Q8NDA2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMCN2Q8NDA2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HMCN2Q8NDA2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC16.19■□□□□ 0.18
HMCN2Q8NDA2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMCN2Q8NDA2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMCN2Q8NDA2 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.18■□□□□ 0.18
HMCN2Q8NDA2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.17■□□□□ 0.18
HMCN2Q8NDA2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.17■□□□□ 0.18
HMCN2Q8NDA2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.17■□□□□ 0.18
HMCN2Q8NDA2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.16■□□□□ 0.18
HMCN2Q8NDA2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HMCN2Q8NDA2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMCN2Q8NDA2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HMCN2Q8NDA2 MIR3648-2-201ENST00000581792 180 ntBASIC16.14■□□□□ 0.17
HMCN2Q8NDA2 MIR3648-1-201ENST00000615959 180 ntBASIC16.14■□□□□ 0.17
HMCN2Q8NDA2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMCN2Q8NDA2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMCN2Q8NDA2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMCN2Q8NDA2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.12■□□□□ 0.17
HMCN2Q8NDA2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMCN2Q8NDA2 CR559946.2-201ENST00000623684 991 ntBASIC16.12■□□□□ 0.17
HMCN2Q8NDA2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMCN2Q8NDA2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HMCN2Q8NDA2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
HMCN2Q8NDA2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMCN2Q8NDA2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HMCN2Q8NDA2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.1■□□□□ 0.17
HMCN2Q8NDA2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms