Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC33.22■■■□□ 2.91
SREBF2Q12772 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
SREBF2Q12772 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.91
SREBF2Q12772 MIR3665-201ENST00000578708 105 ntBASIC33.19■■■□□ 2.9
SREBF2Q12772 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
SREBF2Q12772 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC33.18■■■□□ 2.9
SREBF2Q12772 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC33.18■■■□□ 2.9
SREBF2Q12772 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SREBF2Q12772 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC33.15■■■□□ 2.9
SREBF2Q12772 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC33.15■■■□□ 2.9
SREBF2Q12772 MLEC-202ENST00000412616 841 ntTSL 3 BASIC33.14■■■□□ 2.9
SREBF2Q12772 AL133380.1-201ENST00000506013 324 ntBASIC33.14■■■□□ 2.9
SREBF2Q12772 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
SREBF2Q12772 PVT1-219ENST00000523427 938 ntTSL 3 BASIC33.12■■■□□ 2.89
SREBF2Q12772 AC145285.7-201ENST00000614819 1539 ntBASIC33.12■■■□□ 2.89
SREBF2Q12772 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SREBF2Q12772 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC33.1■■■□□ 2.89
SREBF2Q12772 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
SREBF2Q12772 EBPL-202ENST00000378268 680 ntTSL 3 BASIC33.07■■■□□ 2.88
SREBF2Q12772 HLA-V-202ENST00000446817 847 ntBASIC33.03■■■□□ 2.88
SREBF2Q12772 AC087741.3-201ENST00000624270 1347 ntBASIC33.01■■■□□ 2.87
SREBF2Q12772 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC33■■■□□ 2.87
SREBF2Q12772 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
SREBF2Q12772 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.99■■■□□ 2.87
SREBF2Q12772 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.99■■■□□ 2.87
SREBF2Q12772 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
SREBF2Q12772 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
SREBF2Q12772 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.96■■■□□ 2.87
SREBF2Q12772 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.96■■■□□ 2.87
SREBF2Q12772 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
SREBF2Q12772 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.94■■■□□ 2.86
SREBF2Q12772 AC044849.2-201ENST00000606596 710 ntBASIC32.93■■■□□ 2.86
SREBF2Q12772 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
SREBF2Q12772 DUX4L28-201ENST00000623687 678 ntBASIC32.92■■■□□ 2.86
SREBF2Q12772 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.91■■■□□ 2.86
SREBF2Q12772 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
SREBF2Q12772 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.86
SREBF2Q12772 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.86■■■□□ 2.85
SREBF2Q12772 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.86■■■□□ 2.85
SREBF2Q12772 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.85■■■□□ 2.85
SREBF2Q12772 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.84■■■□□ 2.85
SREBF2Q12772 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.82■■■□□ 2.84
SREBF2Q12772 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.81■■■□□ 2.84
SREBF2Q12772 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
SREBF2Q12772 MIR762-201ENST00000390236 83 ntBASIC32.77■■■□□ 2.84
SREBF2Q12772 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.77■■■□□ 2.84
SREBF2Q12772 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
SREBF2Q12772 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.77■■■□□ 2.84
SREBF2Q12772 AC005559.1-201ENST00000589661 871 ntBASIC32.76■■■□□ 2.83
SREBF2Q12772 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SREBF2Q12772 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.73■■■□□ 2.83
SREBF2Q12772 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.71■■■□□ 2.83
SREBF2Q12772 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SREBF2Q12772 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.7■■■□□ 2.83
SREBF2Q12772 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.68■■■□□ 2.82
SREBF2Q12772 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.68■■■□□ 2.82
SREBF2Q12772 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.68■■■□□ 2.82
SREBF2Q12772 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SREBF2Q12772 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SREBF2Q12772 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SREBF2Q12772 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SREBF2Q12772 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.65■■■□□ 2.82
SREBF2Q12772 ZNRF2P2-203ENST00000454624 420 ntBASIC32.65■■■□□ 2.82
SREBF2Q12772 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.64■■■□□ 2.82
SREBF2Q12772 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.64■■■□□ 2.82
SREBF2Q12772 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.63■■■□□ 2.81
SREBF2Q12772 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SREBF2Q12772 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
SREBF2Q12772 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
SREBF2Q12772 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.6■■■□□ 2.81
SREBF2Q12772 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.58■■■□□ 2.81
SREBF2Q12772 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.57■■■□□ 2.8
SREBF2Q12772 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SREBF2Q12772 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SREBF2Q12772 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
SREBF2Q12772 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SREBF2Q12772 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
SREBF2Q12772 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SREBF2Q12772 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SREBF2Q12772 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
SREBF2Q12772 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
SREBF2Q12772 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.44■■■□□ 2.78
SREBF2Q12772 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.44■■■□□ 2.78
SREBF2Q12772 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.42■■■□□ 2.78
SREBF2Q12772 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.41■■■□□ 2.78
SREBF2Q12772 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SREBF2Q12772 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.38■■■□□ 2.77
SREBF2Q12772 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SREBF2Q12772 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SREBF2Q12772 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
SREBF2Q12772 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.37■■■□□ 2.77
SREBF2Q12772 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
SREBF2Q12772 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
SREBF2Q12772 MIR4449-201ENST00000578365 66 ntBASIC32.32■■■□□ 2.76
SREBF2Q12772 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
SREBF2Q12772 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.31■■■□□ 2.76
SREBF2Q12772 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
SREBF2Q12772 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.3■■■□□ 2.76
SREBF2Q12772 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SREBF2Q12772 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.3■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms