Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAI2O43623 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.57■□□□□ 0.88
SNAI2O43623 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNAI2O43623 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNAI2O43623 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.56■□□□□ 0.88
SNAI2O43623 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.55■□□□□ 0.88
SNAI2O43623 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNAI2O43623 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNAI2O43623 AC015813.7-201ENST00000623294 581 ntBASIC20.54■□□□□ 0.88
SNAI2O43623 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNAI2O43623 AL161658.1-201ENST00000623641 1967 ntBASIC20.51■□□□□ 0.87
SNAI2O43623 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.5■□□□□ 0.87
SNAI2O43623 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.49■□□□□ 0.87
SNAI2O43623 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
SNAI2O43623 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAI2O43623 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNAI2O43623 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SNAI2O43623 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAI2O43623 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAI2O43623 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAI2O43623 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAI2O43623 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAI2O43623 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAI2O43623 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAI2O43623 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SNAI2O43623 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNAI2O43623 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNAI2O43623 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNAI2O43623 AC139426.1-201ENST00000568218 2529 ntBASIC20.44■□□□□ 0.86
SNAI2O43623 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNAI2O43623 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SNAI2O43623 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNAI2O43623 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.42■□□□□ 0.86
SNAI2O43623 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAI2O43623 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAI2O43623 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAI2O43623 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.41■□□□□ 0.86
SNAI2O43623 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAI2O43623 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNAI2O43623 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.39■□□□□ 0.85
SNAI2O43623 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNAI2O43623 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNAI2O43623 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNAI2O43623 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.37■□□□□ 0.85
SNAI2O43623 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SNAI2O43623 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.36■□□□□ 0.85
SNAI2O43623 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNAI2O43623 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNAI2O43623 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SNAI2O43623 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.3■□□□□ 0.84
SNAI2O43623 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNAI2O43623 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNAI2O43623 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNAI2O43623 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.29■□□□□ 0.84
SNAI2O43623 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNAI2O43623 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNAI2O43623 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.28■□□□□ 0.84
SNAI2O43623 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SNAI2O43623 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNAI2O43623 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SNAI2O43623 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.25■□□□□ 0.83
SNAI2O43623 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNAI2O43623 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAI2O43623 AC120057.4-201ENST00000624722 1615 ntBASIC20.24■□□□□ 0.83
SNAI2O43623 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNAI2O43623 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.23■□□□□ 0.83
SNAI2O43623 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNAI2O43623 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNAI2O43623 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SNAI2O43623 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNAI2O43623 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNAI2O43623 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNAI2O43623 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SNAI2O43623 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNAI2O43623 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNAI2O43623 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNAI2O43623 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.17■□□□□ 0.82
SNAI2O43623 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAI2O43623 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SNAI2O43623 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAI2O43623 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.16■□□□□ 0.82
SNAI2O43623 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAI2O43623 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNAI2O43623 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNAI2O43623 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SNAI2O43623 ABCB10P1-201ENST00000614297 2181 ntBASIC20.14■□□□□ 0.81
SNAI2O43623 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAI2O43623 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.13■□□□□ 0.81
SNAI2O43623 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.13■□□□□ 0.81
SNAI2O43623 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.13■□□□□ 0.81
SNAI2O43623 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.12■□□□□ 0.81
SNAI2O43623 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNAI2O43623 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNAI2O43623 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNAI2O43623 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAI2O43623 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.1■□□□□ 0.81
SNAI2O43623 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAI2O43623 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNAI2O43623 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNAI2O43623 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms