Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
TNRC18O15417 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.29■■■□□ 2.76
TNRC18O15417 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
TNRC18O15417 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
TNRC18O15417 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.26■■■□□ 2.76
TNRC18O15417 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
TNRC18O15417 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TNRC18O15417 HSD17B1P1-201ENST00000590052 955 ntBASIC32.22■■■□□ 2.75
TNRC18O15417 DUX4L28-201ENST00000623687 678 ntBASIC32.22■■■□□ 2.75
TNRC18O15417 AC044849.2-201ENST00000606596 710 ntBASIC32.21■■■□□ 2.75
TNRC18O15417 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
TNRC18O15417 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
TNRC18O15417 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.19■■■□□ 2.74
TNRC18O15417 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.16■■■□□ 2.74
TNRC18O15417 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.16■■■□□ 2.74
TNRC18O15417 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.14■■■□□ 2.74
TNRC18O15417 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
TNRC18O15417 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.11■■■□□ 2.73
TNRC18O15417 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.11■■■□□ 2.73
TNRC18O15417 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
TNRC18O15417 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.09■■■□□ 2.73
TNRC18O15417 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TNRC18O15417 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.73
TNRC18O15417 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
TNRC18O15417 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.06■■■□□ 2.72
TNRC18O15417 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
TNRC18O15417 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.04■■■□□ 2.72
TNRC18O15417 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.02■■■□□ 2.72
TNRC18O15417 ZNRF2P2-203ENST00000454624 420 ntBASIC32.02■■■□□ 2.72
TNRC18O15417 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32■■■□□ 2.71
TNRC18O15417 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
TNRC18O15417 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TNRC18O15417 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
TNRC18O15417 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
TNRC18O15417 MIR639-201ENST00000384974 98 ntBASIC31.93■■■□□ 2.7
TNRC18O15417 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TNRC18O15417 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
TNRC18O15417 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TNRC18O15417 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.69
TNRC18O15417 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.89■■■□□ 2.69
TNRC18O15417 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.84■■■□□ 2.69
TNRC18O15417 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
TNRC18O15417 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.82■■■□□ 2.68
TNRC18O15417 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.82■■■□□ 2.68
TNRC18O15417 AC005559.1-201ENST00000589661 871 ntBASIC31.8■■■□□ 2.68
TNRC18O15417 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
TNRC18O15417 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.77■■■□□ 2.68
TNRC18O15417 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
TNRC18O15417 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.77■■■□□ 2.68
TNRC18O15417 AL133380.1-201ENST00000506013 324 ntBASIC31.76■■■□□ 2.68
TNRC18O15417 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.74■■■□□ 2.67
TNRC18O15417 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.73■■■□□ 2.67
TNRC18O15417 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
TNRC18O15417 MIR762-201ENST00000390236 83 ntBASIC31.71■■■□□ 2.67
TNRC18O15417 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
TNRC18O15417 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
TNRC18O15417 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.7■■■□□ 2.66
TNRC18O15417 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
TNRC18O15417 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.69■■■□□ 2.66
TNRC18O15417 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
TNRC18O15417 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
TNRC18O15417 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
TNRC18O15417 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.62■■■□□ 2.65
TNRC18O15417 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
TNRC18O15417 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TNRC18O15417 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.6■■■□□ 2.65
TNRC18O15417 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.6■■■□□ 2.65
TNRC18O15417 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
TNRC18O15417 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
TNRC18O15417 MIR3648-2-201ENST00000581792 180 ntBASIC31.56■■■□□ 2.64
TNRC18O15417 MIR3648-1-201ENST00000615959 180 ntBASIC31.56■■■□□ 2.64
TNRC18O15417 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.54■■■□□ 2.64
TNRC18O15417 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.54■■■□□ 2.64
TNRC18O15417 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.53■■■□□ 2.64
TNRC18O15417 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TNRC18O15417 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.53■■■□□ 2.64
TNRC18O15417 AC016575.1-201ENST00000607026 382 ntBASIC31.53■■■□□ 2.64
TNRC18O15417 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TNRC18O15417 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TNRC18O15417 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
TNRC18O15417 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.45■■■□□ 2.63
TNRC18O15417 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
TNRC18O15417 AC145285.7-201ENST00000614819 1539 ntBASIC31.44■■■□□ 2.62
TNRC18O15417 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.44■■■□□ 2.62
TNRC18O15417 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.43■■■□□ 2.62
TNRC18O15417 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
TNRC18O15417 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
TNRC18O15417 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TNRC18O15417 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TNRC18O15417 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TNRC18O15417 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TNRC18O15417 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TNRC18O15417 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
TNRC18O15417 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.36■■■□□ 2.61
TNRC18O15417 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TNRC18O15417 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.35■■■□□ 2.61
TNRC18O15417 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.35■■■□□ 2.61
TNRC18O15417 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
TNRC18O15417 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
TNRC18O15417 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms