Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IGHV4-28A0A0C4DH34 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.06■□□□□ 0.8
IGHV4-28A0A0C4DH34 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
IGHV4-28A0A0C4DH34 AC097358.2-201ENST00000607541 1159 ntBASIC20.05■□□□□ 0.8
IGHV4-28A0A0C4DH34 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
IGHV4-28A0A0C4DH34 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.03■□□□□ 0.8
IGHV4-28A0A0C4DH34 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.02■□□□□ 0.8
IGHV4-28A0A0C4DH34 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.02■□□□□ 0.8
IGHV4-28A0A0C4DH34 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IGHV4-28A0A0C4DH34 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IGHV4-28A0A0C4DH34 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.99■□□□□ 0.79
IGHV4-28A0A0C4DH34 AC136428.2-201ENST00000563187 214 ntBASIC19.99■□□□□ 0.79
IGHV4-28A0A0C4DH34 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IGHV4-28A0A0C4DH34 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.98■□□□□ 0.79
IGHV4-28A0A0C4DH34 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
IGHV4-28A0A0C4DH34 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.98■□□□□ 0.79
IGHV4-28A0A0C4DH34 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IGHV4-28A0A0C4DH34 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.98■□□□□ 0.79
IGHV4-28A0A0C4DH34 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
IGHV4-28A0A0C4DH34 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.95■□□□□ 0.78
IGHV4-28A0A0C4DH34 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IGHV4-28A0A0C4DH34 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IGHV4-28A0A0C4DH34 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IGHV4-28A0A0C4DH34 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IGHV4-28A0A0C4DH34 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IGHV4-28A0A0C4DH34 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.92■□□□□ 0.78
IGHV4-28A0A0C4DH34 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IGHV4-28A0A0C4DH34 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.92■□□□□ 0.78
IGHV4-28A0A0C4DH34 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
IGHV4-28A0A0C4DH34 AL133380.1-201ENST00000506013 324 ntBASIC19.91■□□□□ 0.78
IGHV4-28A0A0C4DH34 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IGHV4-28A0A0C4DH34 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.9■□□□□ 0.78
IGHV4-28A0A0C4DH34 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IGHV4-28A0A0C4DH34 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IGHV4-28A0A0C4DH34 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
IGHV4-28A0A0C4DH34 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
IGHV4-28A0A0C4DH34 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
IGHV4-28A0A0C4DH34 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IGHV4-28A0A0C4DH34 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.87■□□□□ 0.77
IGHV4-28A0A0C4DH34 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.87■□□□□ 0.77
IGHV4-28A0A0C4DH34 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
IGHV4-28A0A0C4DH34 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
IGHV4-28A0A0C4DH34 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
IGHV4-28A0A0C4DH34 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IGHV4-28A0A0C4DH34 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
IGHV4-28A0A0C4DH34 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
IGHV4-28A0A0C4DH34 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.82■□□□□ 0.76
IGHV4-28A0A0C4DH34 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.82■□□□□ 0.76
IGHV4-28A0A0C4DH34 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.82■□□□□ 0.76
IGHV4-28A0A0C4DH34 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IGHV4-28A0A0C4DH34 SUZ12P1-203ENST00000578195 985 ntBASIC19.81■□□□□ 0.76
IGHV4-28A0A0C4DH34 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IGHV4-28A0A0C4DH34 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
IGHV4-28A0A0C4DH34 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.8■□□□□ 0.76
IGHV4-28A0A0C4DH34 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
IGHV4-28A0A0C4DH34 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.79■□□□□ 0.76
IGHV4-28A0A0C4DH34 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IGHV4-28A0A0C4DH34 CAHM-201ENST00000604200 896 ntBASIC19.79■□□□□ 0.76
IGHV4-28A0A0C4DH34 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.79■□□□□ 0.76
IGHV4-28A0A0C4DH34 AL391121.1-201ENST00000607967 1349 ntBASIC19.77■□□□□ 0.76
IGHV4-28A0A0C4DH34 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
IGHV4-28A0A0C4DH34 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IGHV4-28A0A0C4DH34 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
IGHV4-28A0A0C4DH34 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IGHV4-28A0A0C4DH34 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.76■□□□□ 0.75
IGHV4-28A0A0C4DH34 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IGHV4-28A0A0C4DH34 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IGHV4-28A0A0C4DH34 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IGHV4-28A0A0C4DH34 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IGHV4-28A0A0C4DH34 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IGHV4-28A0A0C4DH34 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IGHV4-28A0A0C4DH34 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IGHV4-28A0A0C4DH34 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IGHV4-28A0A0C4DH34 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IGHV4-28A0A0C4DH34 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IGHV4-28A0A0C4DH34 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
IGHV4-28A0A0C4DH34 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IGHV4-28A0A0C4DH34 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IGHV4-28A0A0C4DH34 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.7■□□□□ 0.74
IGHV4-28A0A0C4DH34 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IGHV4-28A0A0C4DH34 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
IGHV4-28A0A0C4DH34 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IGHV4-28A0A0C4DH34 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
IGHV4-28A0A0C4DH34 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IGHV4-28A0A0C4DH34 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.67■□□□□ 0.74
IGHV4-28A0A0C4DH34 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IGHV4-28A0A0C4DH34 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.66■□□□□ 0.74
IGHV4-28A0A0C4DH34 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
IGHV4-28A0A0C4DH34 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IGHV4-28A0A0C4DH34 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.65■□□□□ 0.74
IGHV4-28A0A0C4DH34 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IGHV4-28A0A0C4DH34 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IGHV4-28A0A0C4DH34 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGHV4-28A0A0C4DH34 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGHV4-28A0A0C4DH34 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGHV4-28A0A0C4DH34 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IGHV4-28A0A0C4DH34 WASH5P-204ENST00000632292 975 ntBASIC19.63■□□□□ 0.73
IGHV4-28A0A0C4DH34 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
IGHV4-28A0A0C4DH34 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.62■□□□□ 0.73
IGHV4-28A0A0C4DH34 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms