Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAV10A0A0B4J240 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV10A0A0B4J240 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV10A0A0B4J240 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
TRAV10A0A0B4J240 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV10A0A0B4J240 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV10A0A0B4J240 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.66■□□□□ 0.74
TRAV10A0A0B4J240 SUZ12P1-203ENST00000578195 985 ntBASIC19.65■□□□□ 0.74
TRAV10A0A0B4J240 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV10A0A0B4J240 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV10A0A0B4J240 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV10A0A0B4J240 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAV10A0A0B4J240 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV10A0A0B4J240 AL133380.1-201ENST00000506013 324 ntBASIC19.62■□□□□ 0.73
TRAV10A0A0B4J240 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV10A0A0B4J240 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV10A0A0B4J240 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV10A0A0B4J240 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAV10A0A0B4J240 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV10A0A0B4J240 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV10A0A0B4J240 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TRAV10A0A0B4J240 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRAV10A0A0B4J240 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAV10A0A0B4J240 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV10A0A0B4J240 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRAV10A0A0B4J240 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV10A0A0B4J240 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV10A0A0B4J240 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV10A0A0B4J240 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV10A0A0B4J240 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV10A0A0B4J240 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV10A0A0B4J240 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRAV10A0A0B4J240 AL391121.1-201ENST00000607967 1349 ntBASIC19.55■□□□□ 0.72
TRAV10A0A0B4J240 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAV10A0A0B4J240 CAHM-201ENST00000604200 896 ntBASIC19.55■□□□□ 0.72
TRAV10A0A0B4J240 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV10A0A0B4J240 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV10A0A0B4J240 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV10A0A0B4J240 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV10A0A0B4J240 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.52■□□□□ 0.71
TRAV10A0A0B4J240 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRAV10A0A0B4J240 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV10A0A0B4J240 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAV10A0A0B4J240 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV10A0A0B4J240 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV10A0A0B4J240 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV10A0A0B4J240 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV10A0A0B4J240 AP006261.1-201ENST00000584783 668 ntBASIC19.44■□□□□ 0.7
TRAV10A0A0B4J240 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV10A0A0B4J240 RPS2P35-201ENST00000443417 897 ntBASIC19.43■□□□□ 0.7
TRAV10A0A0B4J240 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRAV10A0A0B4J240 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV10A0A0B4J240 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.41■□□□□ 0.7
TRAV10A0A0B4J240 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV10A0A0B4J240 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV10A0A0B4J240 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.39■□□□□ 0.69
TRAV10A0A0B4J240 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.37■□□□□ 0.69
TRAV10A0A0B4J240 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAV10A0A0B4J240 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV10A0A0B4J240 AL162393.1-201ENST00000437852 946 ntBASIC19.35■□□□□ 0.69
TRAV10A0A0B4J240 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV10A0A0B4J240 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRAV10A0A0B4J240 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAV10A0A0B4J240 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV10A0A0B4J240 MIR3665-201ENST00000578708 105 ntBASIC19.32■□□□□ 0.68
TRAV10A0A0B4J240 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV10A0A0B4J240 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV10A0A0B4J240 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV10A0A0B4J240 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
TRAV10A0A0B4J240 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV10A0A0B4J240 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV10A0A0B4J240 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV10A0A0B4J240 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV10A0A0B4J240 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.28■□□□□ 0.68
TRAV10A0A0B4J240 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV10A0A0B4J240 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV10A0A0B4J240 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.27■□□□□ 0.68
TRAV10A0A0B4J240 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV10A0A0B4J240 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.27■□□□□ 0.68
TRAV10A0A0B4J240 WASH5P-204ENST00000632292 975 ntBASIC19.27■□□□□ 0.68
TRAV10A0A0B4J240 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRAV10A0A0B4J240 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV10A0A0B4J240 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAV10A0A0B4J240 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV10A0A0B4J240 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV10A0A0B4J240 MIR762-201ENST00000390236 83 ntBASIC19.25■□□□□ 0.67
TRAV10A0A0B4J240 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV10A0A0B4J240 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV10A0A0B4J240 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV10A0A0B4J240 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV10A0A0B4J240 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV10A0A0B4J240 AC005559.1-201ENST00000589661 871 ntBASIC19.23■□□□□ 0.67
TRAV10A0A0B4J240 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV10A0A0B4J240 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAV10A0A0B4J240 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAV10A0A0B4J240 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV10A0A0B4J240 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV10A0A0B4J240 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV10A0A0B4J240 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAV10A0A0B4J240 DUX4L28-201ENST00000623687 678 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms