Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 AC016769.1-201ENST00000409132 1010 ntBASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 AL354811.1-201ENST00000610286 706 ntBASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 PRORSD1P-201ENST00000295112 541 ntBASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSMD1Q96PZ7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.33■□□□□ 0.69
CSMD1Q96PZ7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSMD1Q96PZ7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CSMD1Q96PZ7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.33■□□□□ 0.68
CSMD1Q96PZ7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CSMD1Q96PZ7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CSMD1Q96PZ7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.33■□□□□ 0.68
CSMD1Q96PZ7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CSMD1Q96PZ7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.33■□□□□ 0.68
CSMD1Q96PZ7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.33■□□□□ 0.68
CSMD1Q96PZ7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.33■□□□□ 0.68
CSMD1Q96PZ7 ERN1-208ENST00000606895 2068 ntBASIC19.33■□□□□ 0.68
CSMD1Q96PZ7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 AC137761.2-201ENST00000561729 223 ntBASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 AC145350.3-201ENST00000569033 163 ntBASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSMD1Q96PZ7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSMD1Q96PZ7 AC098590.1-201ENST00000468126 897 ntBASIC19.31■□□□□ 0.68
CSMD1Q96PZ7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.31■□□□□ 0.68
CSMD1Q96PZ7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.31■□□□□ 0.68
CSMD1Q96PZ7 AL138781.1-201ENST00000566567 1274 ntBASIC19.31■□□□□ 0.68
CSMD1Q96PZ7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.31■□□□□ 0.68
CSMD1Q96PZ7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.31■□□□□ 0.68
CSMD1Q96PZ7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 AC131274.2-201ENST00000580697 1507 ntBASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 MIR572-201ENST00000384983 95 ntBASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSMD1Q96PZ7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CSMD1Q96PZ7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 AC069152.1-201ENST00000438030 544 ntBASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 BID-214ENST00000617586 542 ntTSL 5 BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSMD1Q96PZ7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.27■□□□□ 0.68
CSMD1Q96PZ7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms