RNA–Protein interactions for RNA: ENST00000639994.1

SLC35A3-218, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5 BASIC

Gene SLC35A3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-218ENST00000639994 NISCHQ9Y2I1 1504 aa51.06■■■■■ 5.76
SLC35A3-218ENST00000639994 ABCC9O60706 1549 aa45.92■■■■■ 4.94
SLC35A3-218ENST00000639994 CCDC180Q9P1Z9 1646 aa45.81■■■■■ 4.92
SLC35A3-218ENST00000639994 RB1CC1Q8TDY2 1594 aa43.63■■■■■ 4.57
SLC35A3-218ENST00000639994 NACADO15069 1562 aa43.31■■■■■ 4.52
SLC35A3-218ENST00000639994 DCAF8L2P0C7V8 631 aa43.23■■■■■ 4.51
SLC35A3-218ENST00000639994 DNAJC5BQ9UF47 199 aa43.07■■■■■ 4.49
SLC35A3-218ENST00000639994 PABPN1Q86U42 306 aaKnown RBP eCLIP42.76■■■■■ 4.44
SLC35A3-218ENST00000639994 UNC13AQ9UPW8 1703 aa42.69■■■■■ 4.42
SLC35A3-218ENST00000639994 MYO15BQ96JP2 1530 aa42.64■■■■■ 4.42
SLC35A3-218ENST00000639994 BICRAQ9NZM4 1560 aa42.37■■■■■ 4.37
SLC35A3-218ENST00000639994 ZCCHC6Q5VYS8 1495 aaKnown RBP42.31■■■■■ 4.36
SLC35A3-218ENST00000639994 DCAF1Q9Y4B6 1507 aa42.11■■■■■ 4.33
SLC35A3-218ENST00000639994 SCRIBQ14160 1630 aa41.83■■■■■ 4.29
SLC35A3-218ENST00000639994 SHROOM4Q9ULL8 1493 aa41.71■■■■■ 4.27
SLC35A3-218ENST00000639994 CC2D2AQ9P2K1 1620 aa41.44■■■■■ 4.22
SLC35A3-218ENST00000639994 EIF4G1Q04637 1599 aaKnown RBP41.33■■■■■ 4.21
SLC35A3-218ENST00000639994 CECR2Q9BXF3 1484 aa41.33■■■■■ 4.21
SLC35A3-218ENST00000639994 NCAPD3P42695 1498 aa39.97■■■■□ 3.99
SLC35A3-218ENST00000639994 ATAD2BQ9ULI0 1458 aa39.88■■■■□ 3.98
SLC35A3-218ENST00000639994 SMARCA4P51532 1647 aa39.85■■■■□ 3.97
SLC35A3-218ENST00000639994 SMARCA2P51531 1590 aa39.76■■■■□ 3.95
SLC35A3-218ENST00000639994 HMGXB3Q12766 1538 aa39.68■■■■□ 3.94
SLC35A3-218ENST00000639994 BAZ1AQ9NRL2 1556 aaPredicted RBP39.63■■■■□ 3.94
SLC35A3-218ENST00000639994 ERCC6Q03468 1493 aa39.63■■■■□ 3.94
SLC35A3-218ENST00000639994 BAZ1BQ9UIG0 1483 aaKnown RBP39.51■■■■□ 3.92
SLC35A3-218ENST00000639994 DNAJC5Q9H3Z4 198 aa39.51■■■■□ 3.92
SLC35A3-218ENST00000639994 CUX2O14529 1486 aa39.49■■■■□ 3.91
SLC35A3-218ENST00000639994 NESP48681 1621 aa39.43■■■■□ 3.9
SLC35A3-218ENST00000639994 PEG3Q9GZU2 1588 aa39.41■■■■□ 3.9
SLC35A3-218ENST00000639994 MROH2BQ7Z745 1585 aa39.38■■■■□ 3.89
SLC35A3-218ENST00000639994 LAMC3Q9Y6N6 1575 aa39.09■■■■□ 3.85
SLC35A3-218ENST00000639994 THOC2Q8NI27 1593 aaKnown RBP39■■■■□ 3.83
SLC35A3-218ENST00000639994 WIZO95785 1651 aa38.93■■■■□ 3.82
SLC35A3-218ENST00000639994 KIF21AQ7Z4S6 1674 aa38.92■■■■□ 3.82
SLC35A3-218ENST00000639994 PDS5BQ9NTI5 1447 aa38.88■■■■□ 3.81
SLC35A3-218ENST00000639994 CADPSQ9ULU8 1353 aa38.78■■■■□ 3.8
SLC35A3-218ENST00000639994 MRC2Q9UBG0 1479 aa38.55■■■■□ 3.76
SLC35A3-218ENST00000639994 RSF1Q96T23 1441 aaPredicted RBP38.54■■■■□ 3.76
SLC35A3-218ENST00000639994 WDR62O43379 1518 aa38.45■■■■□ 3.75
SLC35A3-218ENST00000639994 CEP164Q9UPV0 1460 aa38.41■■■■□ 3.74
SLC35A3-218ENST00000639994 TOP2AP11388 1531 aaKnown RBP38.39■■■■□ 3.74
SLC35A3-218ENST00000639994 FANCD2Q9BXW9 1451 aa38.37■■■■□ 3.73
SLC35A3-218ENST00000639994 CFTRP13569 1480 aa38.33■■■■□ 3.73
SLC35A3-218ENST00000639994 URB2Q14146 1524 aaKnown RBP38.06■■■■□ 3.68
SLC35A3-218ENST00000639994 CCDC88BA6NC98 1476 aa37.97■■■■□ 3.67
SLC35A3-218ENST00000639994 PRDM2Q13029 1718 aa37.97■■■■□ 3.67
SLC35A3-218ENST00000639994 TRIM41Q8WV44 630 aa37.88■■■■□ 3.65
SLC35A3-218ENST00000639994 OSCARQ8IYS5 282 aa37.72■■■■□ 3.63
SLC35A3-218ENST00000639994 TOPBP1Q92547 1522 aa37.64■■■■□ 3.62
SLC35A3-218ENST00000639994 IFT140Q96RY7 1462 aa37.62■■■■□ 3.61
SLC35A3-218ENST00000639994 ZNF608Q9ULD9 1512 aaPredicted RBP37.61■■■■□ 3.61
SLC35A3-218ENST00000639994 ABCC8Q09428 1581 aa37.51■■■■□ 3.59
SLC35A3-218ENST00000639994 DNMBPQ6XZF7 1577 aa37.49■■■■□ 3.59
SLC35A3-218ENST00000639994 EIF4G3O43432 1585 aaKnown RBP37.39■■■■□ 3.58
SLC35A3-218ENST00000639994 TARBP1Q13395 1621 aaKnown RBP37.29■■■■□ 3.56
SLC35A3-218ENST00000639994 AQRO60306 1485 aaKnown RBP eCLIP37.26■■■■□ 3.56
SLC35A3-218ENST00000639994 RIMBP3CA6NJZ7 1639 aa37.26■■■■□ 3.56
SLC35A3-218ENST00000639994 RIMBP3BA6NNM3 1639 aa37.26■■■■□ 3.56
SLC35A3-218ENST00000639994 RIMBP3Q9UFD9 1639 aa37.26■■■■□ 3.56
SLC35A3-218ENST00000639994 POLA1P09884 1462 aaPredicted RBP37.26■■■■□ 3.55
SLC35A3-218ENST00000639994 RAD54L2Q9Y4B4 1467 aa37.15■■■■□ 3.54
SLC35A3-218ENST00000639994 CHD1O14646 1710 aa37.14■■■■□ 3.54
SLC35A3-218ENST00000639994 ARHGEF11O15085 1522 aa37.13■■■■□ 3.53
SLC35A3-218ENST00000639994 SOGA1O94964 1423 aa37.09■■■■□ 3.53
SLC35A3-218ENST00000639994 FBLN2P98095 1184 aa37.07■■■■□ 3.52
SLC35A3-218ENST00000639994 TDRD9Q8NDG6 1382 aaKnown RBP37.04■■■■□ 3.52
SLC35A3-218ENST00000639994 FGD5Q6ZNL6 1462 aa37.04■■■■□ 3.52
SLC35A3-218ENST00000639994 CUX1P39880 1505 aa37■■■■□ 3.51
SLC35A3-218ENST00000639994 SUPT5HO00267 1087 aaKnown RBP36.92■■■■□ 3.5
SLC35A3-218ENST00000639994 CYB5RLQ6IPT4 315 aa36.9■■■■□ 3.5
SLC35A3-218ENST00000639994 SNAPC4Q5SXM2 1469 aa36.88■■■■□ 3.5
SLC35A3-218ENST00000639994 WDR97A6NE52 1622 aa36.85■■■■□ 3.49
SLC35A3-218ENST00000639994 ARAP1Q96P48 1450 aa36.77■■■■□ 3.48
SLC35A3-218ENST00000639994 GRIN2BQ13224 1484 aa36.75■■■■□ 3.47
SLC35A3-218ENST00000639994 CHMP7Q8WUX9 453 aaPredicted RBP36.75■■■■□ 3.47
SLC35A3-218ENST00000639994 MAGI1Q96QZ7 1491 aaPredicted RBP36.74■■■■□ 3.47
SLC35A3-218ENST00000639994 CLASP1Q7Z460 1538 aa36.66■■■■□ 3.46
SLC35A3-218ENST00000639994 SYNJ1O43426 1573 aa36.66■■■■□ 3.46
SLC35A3-218ENST00000639994 PBRM1Q86U86 1689 aa36.64■■■■□ 3.46
SLC35A3-218ENST00000639994 GAPVD1Q14C86 1478 aa36.63■■■■□ 3.45
SLC35A3-218ENST00000639994 SYNJ2O15056 1496 aa36.62■■■■□ 3.45
SLC35A3-218ENST00000639994 ABCA10Q8WWZ4 1543 aa36.58■■■■□ 3.45
SLC35A3-218ENST00000639994 ABCA5Q8WWZ7 1642 aa36.54■■■■□ 3.44
SLC35A3-218ENST00000639994 TRHP20396 242 aaPredicted RBP36.51■■■■□ 3.44
SLC35A3-218ENST00000639994 WRNQ14191 1432 aaPredicted RBP eCLIP36.43■■■■□ 3.42
SLC35A3-218ENST00000639994 BIVM-ERCC5R4GMW8 1640 aa36.38■■■■□ 3.41
SLC35A3-218ENST00000639994 TOP2BQ02880 1626 aa36.37■■■■□ 3.41
SLC35A3-218ENST00000639994 GRIN2AQ12879 1464 aa36.29■■■■□ 3.4
SLC35A3-218ENST00000639994 ADAMTS12P58397 1594 aa36.27■■■■□ 3.4
SLC35A3-218ENST00000639994 CEP170Q5SW79 1584 aa36.18■■■■□ 3.38
SLC35A3-218ENST00000639994 FHAD1B1AJZ9 1412 aa36.16■■■■□ 3.38
SLC35A3-218ENST00000639994 ERCC6L2Q5T890 1561 aa36.15■■■■□ 3.38
SLC35A3-218ENST00000639994 NUP160Q12769 1436 aa36.15■■■■□ 3.38
SLC35A3-218ENST00000639994 ERICH3Q5RHP9 1530 aa36.11■■■■□ 3.37
SLC35A3-218ENST00000639994 SHROOM2Q13796 1616 aa35.99■■■■□ 3.35
SLC35A3-218ENST00000639994 PRG4Q92954 1404 aaPredicted RBP35.83■■■■□ 3.33
SLC35A3-218ENST00000639994 JPH4Q96JJ6 628 aa35.81■■■■□ 3.32
SLC35A3-218ENST00000639994 RUSC2Q8N2Y8 1516 aa35.77■■■■□ 3.32
SLC35A3-218ENST00000639994 KIF27Q86VH2 1401 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms