RNA–Protein interactions for RNA: ENST00000557126.5

CAMTA1-216, Transcript of calmodulin binding transcription activator 1, humanhuman

TSL 2 BASIC

Gene CAMTA1, Length 486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA1-216ENST00000557126 NISCHQ9Y2I1 1504 aa51.48■■■■■ 5.83
CAMTA1-216ENST00000557126 CCDC180Q9P1Z9 1646 aa46.07■■■■■ 4.97
CAMTA1-216ENST00000557126 ABCC9O60706 1549 aa45.62■■■■■ 4.89
CAMTA1-216ENST00000557126 RB1CC1Q8TDY2 1594 aa43.63■■■■■ 4.58
CAMTA1-216ENST00000557126 NACADO15069 1562 aa43.44■■■■■ 4.54
CAMTA1-216ENST00000557126 DCAF8L2P0C7V8 631 aa43.07■■■■■ 4.49
CAMTA1-216ENST00000557126 MYO15BQ96JP2 1530 aa43.02■■■■■ 4.48
CAMTA1-216ENST00000557126 ZCCHC6Q5VYS8 1495 aaKnown RBP42.78■■■■■ 4.44
CAMTA1-216ENST00000557126 UNC13AQ9UPW8 1703 aa42.68■■■■■ 4.42
CAMTA1-216ENST00000557126 DCAF1Q9Y4B6 1507 aa42.6■■■■■ 4.41
CAMTA1-216ENST00000557126 PABPN1Q86U42 306 aaKnown RBP eCLIP42.48■■■■■ 4.39
CAMTA1-216ENST00000557126 DNAJC5BQ9UF47 199 aa42.46■■■■■ 4.39
CAMTA1-216ENST00000557126 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
CAMTA1-216ENST00000557126 SCRIBQ14160 1630 aa41.95■■■■■ 4.31
CAMTA1-216ENST00000557126 SHROOM4Q9ULL8 1493 aa41.89■■■■■ 4.3
CAMTA1-216ENST00000557126 EIF4G1Q04637 1599 aaKnown RBP41.29■■■■■ 4.2
CAMTA1-216ENST00000557126 CC2D2AQ9P2K1 1620 aa41.27■■■■■ 4.2
CAMTA1-216ENST00000557126 CECR2Q9BXF3 1484 aa41.08■■■■■ 4.17
CAMTA1-216ENST00000557126 SMARCA4P51532 1647 aa40.09■■■■■ 4.01
CAMTA1-216ENST00000557126 NCAPD3P42695 1498 aa40.09■■■■■ 4.01
CAMTA1-216ENST00000557126 ATAD2BQ9ULI0 1458 aa40.02■■■■■ 4
CAMTA1-216ENST00000557126 BAZ1AQ9NRL2 1556 aaPredicted RBP39.93■■■■□ 3.98
CAMTA1-216ENST00000557126 SMARCA2P51531 1590 aa39.93■■■■□ 3.98
CAMTA1-216ENST00000557126 HMGXB3Q12766 1538 aa39.86■■■■□ 3.97
CAMTA1-216ENST00000557126 PEG3Q9GZU2 1588 aa39.75■■■■□ 3.95
CAMTA1-216ENST00000557126 MROH2BQ7Z745 1585 aa39.67■■■■□ 3.94
CAMTA1-216ENST00000557126 BAZ1BQ9UIG0 1483 aaKnown RBP39.62■■■■□ 3.93
CAMTA1-216ENST00000557126 ERCC6Q03468 1493 aa39.34■■■■□ 3.89
CAMTA1-216ENST00000557126 NESP48681 1621 aa39.32■■■■□ 3.88
CAMTA1-216ENST00000557126 CUX2O14529 1486 aa39.22■■■■□ 3.87
CAMTA1-216ENST00000557126 WIZO95785 1651 aa39.19■■■■□ 3.86
CAMTA1-216ENST00000557126 LAMC3Q9Y6N6 1575 aa39.14■■■■□ 3.86
CAMTA1-216ENST00000557126 RSF1Q96T23 1441 aaPredicted RBP38.97■■■■□ 3.83
CAMTA1-216ENST00000557126 THOC2Q8NI27 1593 aaKnown RBP38.91■■■■□ 3.82
CAMTA1-216ENST00000557126 CADPSQ9ULU8 1353 aa38.86■■■■□ 3.81
CAMTA1-216ENST00000557126 KIF21AQ7Z4S6 1674 aa38.85■■■■□ 3.81
CAMTA1-216ENST00000557126 PDS5BQ9NTI5 1447 aa38.85■■■■□ 3.81
CAMTA1-216ENST00000557126 TOP2AP11388 1531 aaKnown RBP38.76■■■■□ 3.8
CAMTA1-216ENST00000557126 DNAJC5Q9H3Z4 198 aa38.7■■■■□ 3.79
CAMTA1-216ENST00000557126 CFTRP13569 1480 aa38.54■■■■□ 3.76
CAMTA1-216ENST00000557126 MRC2Q9UBG0 1479 aa38.53■■■■□ 3.76
CAMTA1-216ENST00000557126 WDR62O43379 1518 aa38.46■■■■□ 3.75
CAMTA1-216ENST00000557126 CEP164Q9UPV0 1460 aa38.44■■■■□ 3.74
CAMTA1-216ENST00000557126 FANCD2Q9BXW9 1451 aa38.42■■■■□ 3.74
CAMTA1-216ENST00000557126 CCDC88BA6NC98 1476 aa38.28■■■■□ 3.72
CAMTA1-216ENST00000557126 PRDM2Q13029 1718 aa38.21■■■■□ 3.71
CAMTA1-216ENST00000557126 URB2Q14146 1524 aaKnown RBP38.12■■■■□ 3.69
CAMTA1-216ENST00000557126 TOPBP1Q92547 1522 aa37.76■■■■□ 3.63
CAMTA1-216ENST00000557126 ABCC8Q09428 1581 aa37.68■■■■□ 3.62
CAMTA1-216ENST00000557126 DNMBPQ6XZF7 1577 aa37.67■■■■□ 3.62
CAMTA1-216ENST00000557126 IFT140Q96RY7 1462 aa37.66■■■■□ 3.62
CAMTA1-216ENST00000557126 ZNF608Q9ULD9 1512 aaPredicted RBP37.56■■■■□ 3.6
CAMTA1-216ENST00000557126 TARBP1Q13395 1621 aaKnown RBP37.43■■■■□ 3.58
CAMTA1-216ENST00000557126 EIF4G3O43432 1585 aaKnown RBP37.42■■■■□ 3.58
CAMTA1-216ENST00000557126 POLA1P09884 1462 aaPredicted RBP37.4■■■■□ 3.58
CAMTA1-216ENST00000557126 OSCARQ8IYS5 282 aa37.38■■■■□ 3.57
CAMTA1-216ENST00000557126 SUPT5HO00267 1087 aaKnown RBP37.37■■■■□ 3.57
CAMTA1-216ENST00000557126 CUX1P39880 1505 aa37.25■■■■□ 3.55
CAMTA1-216ENST00000557126 AQRO60306 1485 aaKnown RBP eCLIP37.24■■■■□ 3.55
CAMTA1-216ENST00000557126 RAD54L2Q9Y4B4 1467 aa37.22■■■■□ 3.55
CAMTA1-216ENST00000557126 FGD5Q6ZNL6 1462 aa37.2■■■■□ 3.55
CAMTA1-216ENST00000557126 SOGA1O94964 1423 aa37.18■■■■□ 3.54
CAMTA1-216ENST00000557126 WDR97A6NE52 1622 aa37.09■■■■□ 3.53
CAMTA1-216ENST00000557126 TRIM41Q8WV44 630 aa37.08■■■■□ 3.53
CAMTA1-216ENST00000557126 TDRD9Q8NDG6 1382 aaKnown RBP37.05■■■■□ 3.52
CAMTA1-216ENST00000557126 CHD1O14646 1710 aa37.04■■■■□ 3.52
CAMTA1-216ENST00000557126 RIMBP3CA6NJZ7 1639 aa36.96■■■■□ 3.51
CAMTA1-216ENST00000557126 RIMBP3BA6NNM3 1639 aa36.96■■■■□ 3.51
CAMTA1-216ENST00000557126 RIMBP3Q9UFD9 1639 aa36.96■■■■□ 3.51
CAMTA1-216ENST00000557126 SNAPC4Q5SXM2 1469 aa36.9■■■■□ 3.5
CAMTA1-216ENST00000557126 ARHGEF11O15085 1522 aa36.88■■■■□ 3.49
CAMTA1-216ENST00000557126 GRIN2BQ13224 1484 aa36.85■■■■□ 3.49
CAMTA1-216ENST00000557126 MAGI1Q96QZ7 1491 aaPredicted RBP36.84■■■■□ 3.49
CAMTA1-216ENST00000557126 ABCA10Q8WWZ4 1543 aa36.83■■■■□ 3.49
CAMTA1-216ENST00000557126 FBLN2P98095 1184 aa36.82■■■■□ 3.48
CAMTA1-216ENST00000557126 ABCA5Q8WWZ7 1642 aa36.77■■■■□ 3.48
CAMTA1-216ENST00000557126 BIVM-ERCC5R4GMW8 1640 aa36.77■■■■□ 3.48
CAMTA1-216ENST00000557126 TOP2BQ02880 1626 aa36.77■■■■□ 3.48
CAMTA1-216ENST00000557126 PBRM1Q86U86 1689 aa36.77■■■■□ 3.48
CAMTA1-216ENST00000557126 GAPVD1Q14C86 1478 aa36.75■■■■□ 3.47
CAMTA1-216ENST00000557126 WRNQ14191 1432 aaPredicted RBP eCLIP36.73■■■■□ 3.47
CAMTA1-216ENST00000557126 SYNJ1O43426 1573 aa36.73■■■■□ 3.47
CAMTA1-216ENST00000557126 SYNJ2O15056 1496 aa36.69■■■■□ 3.46
CAMTA1-216ENST00000557126 CLASP1Q7Z460 1538 aa36.67■■■■□ 3.46
CAMTA1-216ENST00000557126 CHMP7Q8WUX9 453 aaPredicted RBP36.64■■■■□ 3.46
CAMTA1-216ENST00000557126 ARAP1Q96P48 1450 aa36.56■■■■□ 3.44
CAMTA1-216ENST00000557126 CYB5RLQ6IPT4 315 aa36.47■■■■□ 3.43
CAMTA1-216ENST00000557126 ADAMTS12P58397 1594 aa36.45■■■■□ 3.43
CAMTA1-216ENST00000557126 GRIN2AQ12879 1464 aa36.39■■■■□ 3.42
CAMTA1-216ENST00000557126 ERICH3Q5RHP9 1530 aa36.37■■■■□ 3.41
CAMTA1-216ENST00000557126 FHAD1B1AJZ9 1412 aa36.32■■■■□ 3.4
CAMTA1-216ENST00000557126 NUP160Q12769 1436 aa36.28■■■■□ 3.4
CAMTA1-216ENST00000557126 CEP170Q5SW79 1584 aa36.27■■■■□ 3.4
CAMTA1-216ENST00000557126 SHROOM2Q13796 1616 aa36.1■■■■□ 3.37
CAMTA1-216ENST00000557126 ERCC6L2Q5T890 1561 aa36.1■■■■□ 3.37
CAMTA1-216ENST00000557126 KIF27Q86VH2 1401 aa36■■■■□ 3.35
CAMTA1-216ENST00000557126 RUSC2Q8N2Y8 1516 aa35.94■■■■□ 3.34
CAMTA1-216ENST00000557126 IGF1RP08069 1367 aa35.94■■■■□ 3.34
CAMTA1-216ENST00000557126 CUL7Q14999 1698 aa35.91■■■■□ 3.34
CAMTA1-216ENST00000557126 TRHP20396 242 aaPredicted RBP35.9■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms