RNA–Protein interactions for RNA: ENST00000420393.5

TRNT1-207, Transcript of tRNA nucleotidyl transferase 1, humanhuman

TSL 3 BASIC

Gene TRNT1, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNT1-207ENST00000420393 NISCHQ9Y2I1 1504 aa51.47■■■■■ 5.83
TRNT1-207ENST00000420393 ABCC9O60706 1549 aa46.09■■■■■ 4.97
TRNT1-207ENST00000420393 CCDC180Q9P1Z9 1646 aa46.06■■■■■ 4.96
TRNT1-207ENST00000420393 RB1CC1Q8TDY2 1594 aa43.83■■■■■ 4.61
TRNT1-207ENST00000420393 DCAF8L2P0C7V8 631 aa43.63■■■■■ 4.57
TRNT1-207ENST00000420393 NACADO15069 1562 aa43.52■■■■■ 4.56
TRNT1-207ENST00000420393 DNAJC5BQ9UF47 199 aa43.01■■■■■ 4.48
TRNT1-207ENST00000420393 PABPN1Q86U42 306 aaKnown RBP eCLIP42.98■■■■■ 4.47
TRNT1-207ENST00000420393 MYO15BQ96JP2 1530 aa42.86■■■■■ 4.45
TRNT1-207ENST00000420393 UNC13AQ9UPW8 1703 aa42.82■■■■■ 4.44
TRNT1-207ENST00000420393 ZCCHC6Q5VYS8 1495 aaKnown RBP42.7■■■■■ 4.43
TRNT1-207ENST00000420393 BICRAQ9NZM4 1560 aa42.52■■■■■ 4.4
TRNT1-207ENST00000420393 DCAF1Q9Y4B6 1507 aa42.41■■■■■ 4.38
TRNT1-207ENST00000420393 SCRIBQ14160 1630 aa42.17■■■■■ 4.34
TRNT1-207ENST00000420393 SHROOM4Q9ULL8 1493 aa41.85■■■■■ 4.29
TRNT1-207ENST00000420393 CC2D2AQ9P2K1 1620 aa41.56■■■■■ 4.24
TRNT1-207ENST00000420393 EIF4G1Q04637 1599 aaKnown RBP41.5■■■■■ 4.23
TRNT1-207ENST00000420393 CECR2Q9BXF3 1484 aa41.45■■■■■ 4.23
TRNT1-207ENST00000420393 NCAPD3P42695 1498 aa40.15■■■■■ 4.02
TRNT1-207ENST00000420393 SMARCA4P51532 1647 aa40.14■■■■■ 4.02
TRNT1-207ENST00000420393 ATAD2BQ9ULI0 1458 aa40.13■■■■■ 4.01
TRNT1-207ENST00000420393 SMARCA2P51531 1590 aa40.01■■■■□ 3.99
TRNT1-207ENST00000420393 BAZ1AQ9NRL2 1556 aaPredicted RBP39.95■■■■□ 3.99
TRNT1-207ENST00000420393 HMGXB3Q12766 1538 aa39.89■■■■□ 3.98
TRNT1-207ENST00000420393 BAZ1BQ9UIG0 1483 aaKnown RBP39.81■■■■□ 3.96
TRNT1-207ENST00000420393 ERCC6Q03468 1493 aa39.8■■■■□ 3.96
TRNT1-207ENST00000420393 MROH2BQ7Z745 1585 aa39.72■■■■□ 3.95
TRNT1-207ENST00000420393 PEG3Q9GZU2 1588 aa39.63■■■■□ 3.94
TRNT1-207ENST00000420393 NESP48681 1621 aa39.62■■■■□ 3.93
TRNT1-207ENST00000420393 CUX2O14529 1486 aa39.51■■■■□ 3.92
TRNT1-207ENST00000420393 DNAJC5Q9H3Z4 198 aa39.31■■■■□ 3.88
TRNT1-207ENST00000420393 WIZO95785 1651 aa39.28■■■■□ 3.88
TRNT1-207ENST00000420393 LAMC3Q9Y6N6 1575 aa39.26■■■■□ 3.88
TRNT1-207ENST00000420393 THOC2Q8NI27 1593 aaKnown RBP39.11■■■■□ 3.85
TRNT1-207ENST00000420393 KIF21AQ7Z4S6 1674 aa39.08■■■■□ 3.85
TRNT1-207ENST00000420393 PDS5BQ9NTI5 1447 aa39.06■■■■□ 3.84
TRNT1-207ENST00000420393 CADPSQ9ULU8 1353 aa39■■■■□ 3.83
TRNT1-207ENST00000420393 RSF1Q96T23 1441 aaPredicted RBP38.93■■■■□ 3.82
TRNT1-207ENST00000420393 TOP2AP11388 1531 aaKnown RBP38.74■■■■□ 3.79
TRNT1-207ENST00000420393 MRC2Q9UBG0 1479 aa38.74■■■■□ 3.79
TRNT1-207ENST00000420393 CEP164Q9UPV0 1460 aa38.65■■■■□ 3.78
TRNT1-207ENST00000420393 FANCD2Q9BXW9 1451 aa38.61■■■■□ 3.77
TRNT1-207ENST00000420393 WDR62O43379 1518 aa38.59■■■■□ 3.77
TRNT1-207ENST00000420393 CFTRP13569 1480 aa38.57■■■■□ 3.76
TRNT1-207ENST00000420393 CCDC88BA6NC98 1476 aa38.32■■■■□ 3.72
TRNT1-207ENST00000420393 URB2Q14146 1524 aaKnown RBP38.28■■■■□ 3.72
TRNT1-207ENST00000420393 PRDM2Q13029 1718 aa38.19■■■■□ 3.7
TRNT1-207ENST00000420393 TRIM41Q8WV44 630 aa37.89■■■■□ 3.66
TRNT1-207ENST00000420393 TOPBP1Q92547 1522 aa37.88■■■■□ 3.65
TRNT1-207ENST00000420393 IFT140Q96RY7 1462 aa37.82■■■■□ 3.64
TRNT1-207ENST00000420393 ZNF608Q9ULD9 1512 aaPredicted RBP37.81■■■■□ 3.64
TRNT1-207ENST00000420393 OSCARQ8IYS5 282 aa37.8■■■■□ 3.64
TRNT1-207ENST00000420393 DNMBPQ6XZF7 1577 aa37.75■■■■□ 3.63
TRNT1-207ENST00000420393 ABCC8Q09428 1581 aa37.73■■■■□ 3.63
TRNT1-207ENST00000420393 EIF4G3O43432 1585 aaKnown RBP37.59■■■■□ 3.61
TRNT1-207ENST00000420393 SUPT5HO00267 1087 aaKnown RBP37.55■■■■□ 3.6
TRNT1-207ENST00000420393 POLA1P09884 1462 aaPredicted RBP37.52■■■■□ 3.6
TRNT1-207ENST00000420393 AQRO60306 1485 aaKnown RBP eCLIP37.5■■■■□ 3.59
TRNT1-207ENST00000420393 TARBP1Q13395 1621 aaKnown RBP37.49■■■■□ 3.59
TRNT1-207ENST00000420393 RAD54L2Q9Y4B4 1467 aa37.43■■■■□ 3.58
TRNT1-207ENST00000420393 SOGA1O94964 1423 aa37.36■■■■□ 3.57
TRNT1-207ENST00000420393 FBLN2P98095 1184 aa37.34■■■■□ 3.57
TRNT1-207ENST00000420393 FGD5Q6ZNL6 1462 aa37.33■■■■□ 3.57
TRNT1-207ENST00000420393 TDRD9Q8NDG6 1382 aaKnown RBP37.31■■■■□ 3.56
TRNT1-207ENST00000420393 RIMBP3CA6NJZ7 1639 aa37.31■■■■□ 3.56
TRNT1-207ENST00000420393 RIMBP3BA6NNM3 1639 aa37.31■■■■□ 3.56
TRNT1-207ENST00000420393 RIMBP3Q9UFD9 1639 aa37.31■■■■□ 3.56
TRNT1-207ENST00000420393 CUX1P39880 1505 aa37.31■■■■□ 3.56
TRNT1-207ENST00000420393 CHD1O14646 1710 aa37.28■■■■□ 3.56
TRNT1-207ENST00000420393 ARHGEF11O15085 1522 aa37.2■■■■□ 3.55
TRNT1-207ENST00000420393 SNAPC4Q5SXM2 1469 aa37.13■■■■□ 3.53
TRNT1-207ENST00000420393 WDR97A6NE52 1622 aa37.04■■■■□ 3.52
TRNT1-207ENST00000420393 GRIN2BQ13224 1484 aa37■■■■□ 3.51
TRNT1-207ENST00000420393 CYB5RLQ6IPT4 315 aa36.99■■■■□ 3.51
TRNT1-207ENST00000420393 CHMP7Q8WUX9 453 aaPredicted RBP36.99■■■■□ 3.51
TRNT1-207ENST00000420393 MAGI1Q96QZ7 1491 aaPredicted RBP36.95■■■■□ 3.51
TRNT1-207ENST00000420393 GAPVD1Q14C86 1478 aa36.9■■■■□ 3.5
TRNT1-207ENST00000420393 PBRM1Q86U86 1689 aa36.88■■■■□ 3.49
TRNT1-207ENST00000420393 ARAP1Q96P48 1450 aa36.85■■■■□ 3.49
TRNT1-207ENST00000420393 ABCA10Q8WWZ4 1543 aa36.85■■■■□ 3.49
TRNT1-207ENST00000420393 SYNJ2O15056 1496 aa36.84■■■■□ 3.49
TRNT1-207ENST00000420393 SYNJ1O43426 1573 aa36.83■■■■□ 3.49
TRNT1-207ENST00000420393 CLASP1Q7Z460 1538 aa36.8■■■■□ 3.48
TRNT1-207ENST00000420393 ABCA5Q8WWZ7 1642 aa36.79■■■■□ 3.48
TRNT1-207ENST00000420393 WRNQ14191 1432 aaPredicted RBP eCLIP36.77■■■■□ 3.48
TRNT1-207ENST00000420393 TOP2BQ02880 1626 aa36.71■■■■□ 3.47
TRNT1-207ENST00000420393 BIVM-ERCC5R4GMW8 1640 aa36.7■■■■□ 3.47
TRNT1-207ENST00000420393 TRHP20396 242 aaPredicted RBP36.6■■■■□ 3.45
TRNT1-207ENST00000420393 ADAMTS12P58397 1594 aa36.54■■■■□ 3.44
TRNT1-207ENST00000420393 GRIN2AQ12879 1464 aa36.53■■■■□ 3.44
TRNT1-207ENST00000420393 FHAD1B1AJZ9 1412 aa36.42■■■■□ 3.42
TRNT1-207ENST00000420393 CEP170Q5SW79 1584 aa36.4■■■■□ 3.42
TRNT1-207ENST00000420393 ERICH3Q5RHP9 1530 aa36.39■■■■□ 3.42
TRNT1-207ENST00000420393 NUP160Q12769 1436 aa36.34■■■■□ 3.41
TRNT1-207ENST00000420393 ERCC6L2Q5T890 1561 aa36.33■■■■□ 3.41
TRNT1-207ENST00000420393 SHROOM2Q13796 1616 aa36.15■■■■□ 3.38
TRNT1-207ENST00000420393 PRG4Q92954 1404 aaPredicted RBP36.08■■■■□ 3.37
TRNT1-207ENST00000420393 KIF27Q86VH2 1401 aa36.05■■■■□ 3.36
TRNT1-207ENST00000420393 JPH4Q96JJ6 628 aa36.03■■■■□ 3.36
TRNT1-207ENST00000420393 RUSC2Q8N2Y8 1516 aa36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms