RNA–Protein interactions for RNA: ENST00000447009.1

APTR-205, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 2 BASIC

Gene APTR, Length 902 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-205ENST00000447009 NISCHQ9Y2I1 1504 aa51.5■■■■■ 5.84
APTR-205ENST00000447009 ABCC9O60706 1549 aa46.35■■■■■ 5.01
APTR-205ENST00000447009 CCDC180Q9P1Z9 1646 aa46.28■■■■■ 5
APTR-205ENST00000447009 RB1CC1Q8TDY2 1594 aa44.06■■■■■ 4.64
APTR-205ENST00000447009 NACADO15069 1562 aa43.71■■■■■ 4.59
APTR-205ENST00000447009 DCAF8L2P0C7V8 631 aa43.51■■■■■ 4.56
APTR-205ENST00000447009 DNAJC5BQ9UF47 199 aa43.44■■■■■ 4.54
APTR-205ENST00000447009 UNC13AQ9UPW8 1703 aa43.16■■■■■ 4.5
APTR-205ENST00000447009 PABPN1Q86U42 306 aaKnown RBP eCLIP43.11■■■■■ 4.49
APTR-205ENST00000447009 MYO15BQ96JP2 1530 aa43.04■■■■■ 4.48
APTR-205ENST00000447009 BICRAQ9NZM4 1560 aa42.79■■■■■ 4.44
APTR-205ENST00000447009 ZCCHC6Q5VYS8 1495 aaKnown RBP42.69■■■■■ 4.42
APTR-205ENST00000447009 DCAF1Q9Y4B6 1507 aa42.49■■■■■ 4.39
APTR-205ENST00000447009 SCRIBQ14160 1630 aa42.24■■■■■ 4.35
APTR-205ENST00000447009 SHROOM4Q9ULL8 1493 aa42.13■■■■■ 4.34
APTR-205ENST00000447009 CC2D2AQ9P2K1 1620 aa41.87■■■■■ 4.29
APTR-205ENST00000447009 EIF4G1Q04637 1599 aaKnown RBP41.75■■■■■ 4.27
APTR-205ENST00000447009 CECR2Q9BXF3 1484 aa41.72■■■■■ 4.27
APTR-205ENST00000447009 NCAPD3P42695 1498 aa40.32■■■■■ 4.04
APTR-205ENST00000447009 SMARCA4P51532 1647 aa40.24■■■■■ 4.03
APTR-205ENST00000447009 ATAD2BQ9ULI0 1458 aa40.24■■■■■ 4.03
APTR-205ENST00000447009 SMARCA2P51531 1590 aa40.13■■■■■ 4.01
APTR-205ENST00000447009 HMGXB3Q12766 1538 aa40.07■■■■■ 4.01
APTR-205ENST00000447009 ERCC6Q03468 1493 aa40.01■■■■■ 4
APTR-205ENST00000447009 BAZ1AQ9NRL2 1556 aaPredicted RBP40■■■■□ 3.99
APTR-205ENST00000447009 CUX2O14529 1486 aa39.91■■■■□ 3.98
APTR-205ENST00000447009 DNAJC5Q9H3Z4 198 aa39.88■■■■□ 3.97
APTR-205ENST00000447009 BAZ1BQ9UIG0 1483 aaKnown RBP39.88■■■■□ 3.97
APTR-205ENST00000447009 NESP48681 1621 aa39.81■■■■□ 3.96
APTR-205ENST00000447009 PEG3Q9GZU2 1588 aa39.78■■■■□ 3.96
APTR-205ENST00000447009 MROH2BQ7Z745 1585 aa39.72■■■■□ 3.95
APTR-205ENST00000447009 LAMC3Q9Y6N6 1575 aa39.47■■■■□ 3.91
APTR-205ENST00000447009 THOC2Q8NI27 1593 aaKnown RBP39.43■■■■□ 3.9
APTR-205ENST00000447009 KIF21AQ7Z4S6 1674 aa39.35■■■■□ 3.89
APTR-205ENST00000447009 WIZO95785 1651 aa39.29■■■■□ 3.88
APTR-205ENST00000447009 PDS5BQ9NTI5 1447 aa39.22■■■■□ 3.87
APTR-205ENST00000447009 CADPSQ9ULU8 1353 aa39.1■■■■□ 3.85
APTR-205ENST00000447009 MRC2Q9UBG0 1479 aa38.93■■■■□ 3.82
APTR-205ENST00000447009 RSF1Q96T23 1441 aaPredicted RBP38.84■■■■□ 3.81
APTR-205ENST00000447009 WDR62O43379 1518 aa38.84■■■■□ 3.81
APTR-205ENST00000447009 CEP164Q9UPV0 1460 aa38.78■■■■□ 3.8
APTR-205ENST00000447009 TOP2AP11388 1531 aaKnown RBP38.75■■■■□ 3.79
APTR-205ENST00000447009 FANCD2Q9BXW9 1451 aa38.72■■■■□ 3.79
APTR-205ENST00000447009 CFTRP13569 1480 aa38.66■■■■□ 3.78
APTR-205ENST00000447009 URB2Q14146 1524 aaKnown RBP38.42■■■■□ 3.74
APTR-205ENST00000447009 PRDM2Q13029 1718 aa38.4■■■■□ 3.74
APTR-205ENST00000447009 CCDC88BA6NC98 1476 aa38.28■■■■□ 3.72
APTR-205ENST00000447009 TRIM41Q8WV44 630 aa38.23■■■■□ 3.71
APTR-205ENST00000447009 OSCARQ8IYS5 282 aa38.03■■■■□ 3.68
APTR-205ENST00000447009 TOPBP1Q92547 1522 aa37.98■■■■□ 3.67
APTR-205ENST00000447009 IFT140Q96RY7 1462 aa37.97■■■■□ 3.67
APTR-205ENST00000447009 ZNF608Q9ULD9 1512 aaPredicted RBP37.96■■■■□ 3.67
APTR-205ENST00000447009 DNMBPQ6XZF7 1577 aa37.85■■■■□ 3.65
APTR-205ENST00000447009 ABCC8Q09428 1581 aa37.83■■■■□ 3.65
APTR-205ENST00000447009 EIF4G3O43432 1585 aaKnown RBP37.78■■■■□ 3.64
APTR-205ENST00000447009 RIMBP3CA6NJZ7 1639 aa37.66■■■■□ 3.62
APTR-205ENST00000447009 RIMBP3BA6NNM3 1639 aa37.66■■■■□ 3.62
APTR-205ENST00000447009 TARBP1Q13395 1621 aaKnown RBP37.66■■■■□ 3.62
APTR-205ENST00000447009 RIMBP3Q9UFD9 1639 aa37.66■■■■□ 3.62
APTR-205ENST00000447009 POLA1P09884 1462 aaPredicted RBP37.59■■■■□ 3.61
APTR-205ENST00000447009 AQRO60306 1485 aaKnown RBP eCLIP37.58■■■■□ 3.61
APTR-205ENST00000447009 CHD1O14646 1710 aa37.55■■■■□ 3.6
APTR-205ENST00000447009 ARHGEF11O15085 1522 aa37.51■■■■□ 3.59
APTR-205ENST00000447009 RAD54L2Q9Y4B4 1467 aa37.47■■■■□ 3.59
APTR-205ENST00000447009 SOGA1O94964 1423 aa37.39■■■■□ 3.58
APTR-205ENST00000447009 FGD5Q6ZNL6 1462 aa37.37■■■■□ 3.57
APTR-205ENST00000447009 FBLN2P98095 1184 aa37.35■■■■□ 3.57
APTR-205ENST00000447009 TDRD9Q8NDG6 1382 aaKnown RBP37.34■■■■□ 3.57
APTR-205ENST00000447009 CUX1P39880 1505 aa37.33■■■■□ 3.57
APTR-205ENST00000447009 SNAPC4Q5SXM2 1469 aa37.24■■■■□ 3.55
APTR-205ENST00000447009 WDR97A6NE52 1622 aa37.24■■■■□ 3.55
APTR-205ENST00000447009 CYB5RLQ6IPT4 315 aa37.19■■■■□ 3.54
APTR-205ENST00000447009 ARAP1Q96P48 1450 aa37.14■■■■□ 3.54
APTR-205ENST00000447009 SUPT5HO00267 1087 aaKnown RBP37.13■■■■□ 3.53
APTR-205ENST00000447009 GRIN2BQ13224 1484 aa37.08■■■■□ 3.53
APTR-205ENST00000447009 MAGI1Q96QZ7 1491 aaPredicted RBP37.08■■■■□ 3.53
APTR-205ENST00000447009 PBRM1Q86U86 1689 aa37.04■■■■□ 3.52
APTR-205ENST00000447009 CLASP1Q7Z460 1538 aa37.04■■■■□ 3.52
APTR-205ENST00000447009 CHMP7Q8WUX9 453 aaPredicted RBP37.03■■■■□ 3.52
APTR-205ENST00000447009 SYNJ1O43426 1573 aa37.02■■■■□ 3.52
APTR-205ENST00000447009 SYNJ2O15056 1496 aa36.96■■■■□ 3.51
APTR-205ENST00000447009 GAPVD1Q14C86 1478 aa36.95■■■■□ 3.51
APTR-205ENST00000447009 ABCA5Q8WWZ7 1642 aa36.91■■■■□ 3.5
APTR-205ENST00000447009 ABCA10Q8WWZ4 1543 aa36.9■■■■□ 3.5
APTR-205ENST00000447009 TRHP20396 242 aaPredicted RBP36.82■■■■□ 3.48
APTR-205ENST00000447009 BIVM-ERCC5R4GMW8 1640 aa36.74■■■■□ 3.47
APTR-205ENST00000447009 WRNQ14191 1432 aaPredicted RBP eCLIP36.73■■■■□ 3.47
APTR-205ENST00000447009 TOP2BQ02880 1626 aa36.7■■■■□ 3.47
APTR-205ENST00000447009 ADAMTS12P58397 1594 aa36.65■■■■□ 3.46
APTR-205ENST00000447009 GRIN2AQ12879 1464 aa36.62■■■■□ 3.45
APTR-205ENST00000447009 CEP170Q5SW79 1584 aa36.53■■■■□ 3.44
APTR-205ENST00000447009 ERCC6L2Q5T890 1561 aa36.5■■■■□ 3.43
APTR-205ENST00000447009 NUP160Q12769 1436 aa36.48■■■■□ 3.43
APTR-205ENST00000447009 FHAD1B1AJZ9 1412 aa36.47■■■■□ 3.43
APTR-205ENST00000447009 ERICH3Q5RHP9 1530 aa36.44■■■■□ 3.42
APTR-205ENST00000447009 SHROOM2Q13796 1616 aa36.36■■■■□ 3.41
APTR-205ENST00000447009 PRG4Q92954 1404 aaPredicted RBP36.15■■■■□ 3.38
APTR-205ENST00000447009 RUSC2Q8N2Y8 1516 aa36.13■■■■□ 3.38
APTR-205ENST00000447009 JPH4Q96JJ6 628 aa36.06■■■■□ 3.36
APTR-205ENST00000447009 CUL7Q14999 1698 aa35.95■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms