Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
BCKDHBP21953 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.56■■□□□ 1.2
BCKDHBP21953 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.56■■□□□ 1.2
BCKDHBP21953 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BCKDHBP21953 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BCKDHBP21953 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.56■■□□□ 1.2
BCKDHBP21953 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BCKDHBP21953 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BCKDHBP21953 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BCKDHBP21953 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
BCKDHBP21953 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BCKDHBP21953 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BCKDHBP21953 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BCKDHBP21953 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.55■■□□□ 1.2
BCKDHBP21953 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
BCKDHBP21953 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
BCKDHBP21953 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BCKDHBP21953 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.54■■□□□ 1.2
BCKDHBP21953 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
BCKDHBP21953 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.54■■□□□ 1.2
BCKDHBP21953 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.54■■□□□ 1.2
BCKDHBP21953 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BCKDHBP21953 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.54■■□□□ 1.2
BCKDHBP21953 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BCKDHBP21953 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.54■■□□□ 1.2
BCKDHBP21953 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BCKDHBP21953 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BCKDHBP21953 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BCKDHBP21953 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
BCKDHBP21953 AC027612.3-201ENST00000413684 1047 ntBASIC22.53■■□□□ 1.2
BCKDHBP21953 AC004911.1-201ENST00000416316 871 ntBASIC22.53■■□□□ 1.2
BCKDHBP21953 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BCKDHBP21953 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.53■■□□□ 1.2
BCKDHBP21953 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BCKDHBP21953 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BCKDHBP21953 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
BCKDHBP21953 DUSP8P4-201ENST00000399538 1761 ntBASIC22.53■■□□□ 1.2
BCKDHBP21953 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.52■■□□□ 1.2
BCKDHBP21953 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BCKDHBP21953 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
BCKDHBP21953 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
BCKDHBP21953 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
BCKDHBP21953 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.52■■□□□ 1.2
BCKDHBP21953 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.52■■□□□ 1.2
BCKDHBP21953 AL358852.1-201ENST00000623174 1268 ntBASIC22.52■■□□□ 1.2
BCKDHBP21953 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BCKDHBP21953 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BCKDHBP21953 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BCKDHBP21953 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
BCKDHBP21953 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
BCKDHBP21953 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.52■■□□□ 1.2
BCKDHBP21953 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
BCKDHBP21953 IGHV3-19-201ENST00000521488 291 ntBASIC22.51■■□□□ 1.19
BCKDHBP21953 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.51■■□□□ 1.19
BCKDHBP21953 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.51■■□□□ 1.19
BCKDHBP21953 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
BCKDHBP21953 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BCKDHBP21953 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BCKDHBP21953 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
BCKDHBP21953 AC141586.4-201ENST00000624558 1573 ntBASIC22.5■■□□□ 1.19
BCKDHBP21953 HLA-L-211ENST00000482052 1765 ntBASIC22.5■■□□□ 1.19
BCKDHBP21953 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
BCKDHBP21953 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BCKDHBP21953 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.5■■□□□ 1.19
BCKDHBP21953 AC123595.1-201ENST00000440769 1046 ntBASIC22.5■■□□□ 1.19
BCKDHBP21953 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.5■■□□□ 1.19
BCKDHBP21953 AC012414.1-201ENST00000556676 535 ntBASIC22.5■■□□□ 1.19
BCKDHBP21953 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BCKDHBP21953 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BCKDHBP21953 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BCKDHBP21953 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
BCKDHBP21953 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
BCKDHBP21953 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.5■■□□□ 1.19
BCKDHBP21953 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
BCKDHBP21953 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
BCKDHBP21953 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.49■■□□□ 1.19
BCKDHBP21953 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.49■■□□□ 1.19
BCKDHBP21953 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.49■■□□□ 1.19
BCKDHBP21953 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.49■■□□□ 1.19
BCKDHBP21953 MIR572-201ENST00000384983 95 ntBASIC22.49■■□□□ 1.19
BCKDHBP21953 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.49■■□□□ 1.19
BCKDHBP21953 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BCKDHBP21953 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.49■■□□□ 1.19
BCKDHBP21953 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BCKDHBP21953 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
BCKDHBP21953 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BCKDHBP21953 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.48■■□□□ 1.19
BCKDHBP21953 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
BCKDHBP21953 CCDC92B-201ENST00000575506 885 ntBASIC22.48■■□□□ 1.19
BCKDHBP21953 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BCKDHBP21953 ALDH1A3-203ENST00000557963 1670 ntBASIC22.48■■□□□ 1.19
BCKDHBP21953 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.48■■□□□ 1.19
BCKDHBP21953 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
BCKDHBP21953 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
BCKDHBP21953 AL161729.1-201ENST00000604104 1402 ntBASIC22.48■■□□□ 1.19
BCKDHBP21953 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BCKDHBP21953 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
BCKDHBP21953 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
BCKDHBP21953 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.47■■□□□ 1.19
BCKDHBP21953 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms