Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SDF2Q99470 AC092068.2-201ENST00000590491 1708 ntBASIC21■□□□□ 0.95
SDF2Q99470 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SDF2Q99470 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SDF2Q99470 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SDF2Q99470 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SDF2Q99470 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SDF2Q99470 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.99■□□□□ 0.95
SDF2Q99470 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SDF2Q99470 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.99■□□□□ 0.95
SDF2Q99470 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SDF2Q99470 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.99■□□□□ 0.95
SDF2Q99470 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SDF2Q99470 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SDF2Q99470 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.99■□□□□ 0.95
SDF2Q99470 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SDF2Q99470 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SDF2Q99470 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SDF2Q99470 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SDF2Q99470 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SDF2Q99470 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.98■□□□□ 0.95
SDF2Q99470 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.98■□□□□ 0.95
SDF2Q99470 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
SDF2Q99470 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDF2Q99470 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SDF2Q99470 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDF2Q99470 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SDF2Q99470 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SDF2Q99470 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.98■□□□□ 0.95
SDF2Q99470 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.98■□□□□ 0.95
SDF2Q99470 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SDF2Q99470 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.98■□□□□ 0.95
SDF2Q99470 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SDF2Q99470 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.98■□□□□ 0.95
SDF2Q99470 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SDF2Q99470 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SDF2Q99470 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SDF2Q99470 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SDF2Q99470 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.97■□□□□ 0.95
SDF2Q99470 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SDF2Q99470 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SDF2Q99470 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SDF2Q99470 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SDF2Q99470 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SDF2Q99470 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SDF2Q99470 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.96■□□□□ 0.95
SDF2Q99470 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SDF2Q99470 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SDF2Q99470 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SDF2Q99470 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SDF2Q99470 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.96■□□□□ 0.95
SDF2Q99470 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.96■□□□□ 0.95
SDF2Q99470 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SDF2Q99470 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.96■□□□□ 0.95
SDF2Q99470 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.96■□□□□ 0.95
SDF2Q99470 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.96■□□□□ 0.95
SDF2Q99470 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SDF2Q99470 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
SDF2Q99470 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDF2Q99470 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.95■□□□□ 0.94
SDF2Q99470 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SDF2Q99470 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDF2Q99470 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SDF2Q99470 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDF2Q99470 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDF2Q99470 Z92544.1-202ENST00000571933 1220 ntBASIC20.95■□□□□ 0.94
SDF2Q99470 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.95■□□□□ 0.94
SDF2Q99470 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SDF2Q99470 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.95■□□□□ 0.94
SDF2Q99470 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDF2Q99470 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SDF2Q99470 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
SDF2Q99470 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SDF2Q99470 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
SDF2Q99470 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.95■□□□□ 0.94
SDF2Q99470 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SDF2Q99470 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDF2Q99470 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.94■□□□□ 0.94
SDF2Q99470 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDF2Q99470 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDF2Q99470 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDF2Q99470 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.94■□□□□ 0.94
SDF2Q99470 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDF2Q99470 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SDF2Q99470 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SDF2Q99470 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.94■□□□□ 0.94
SDF2Q99470 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SDF2Q99470 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDF2Q99470 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDF2Q99470 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDF2Q99470 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SDF2Q99470 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDF2Q99470 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.93■□□□□ 0.94
SDF2Q99470 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SDF2Q99470 MIR6722-201ENST00000617286 78 ntBASIC20.93■□□□□ 0.94
SDF2Q99470 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.93■□□□□ 0.94
SDF2Q99470 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SDF2Q99470 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.93■□□□□ 0.94
SDF2Q99470 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.93■□□□□ 0.94
SDF2Q99470 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms