Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.75■■■□□ 2.19
SH3TC1Q8TE82 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SH3TC1Q8TE82 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
SH3TC1Q8TE82 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SH3TC1Q8TE82 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SH3TC1Q8TE82 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SH3TC1Q8TE82 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
SH3TC1Q8TE82 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SH3TC1Q8TE82 SYT6-210ENST00000641643 1587 ntBASIC28.74■■■□□ 2.19
SH3TC1Q8TE82 AC009102.2-201ENST00000606772 1639 ntBASIC28.74■■■□□ 2.19
SH3TC1Q8TE82 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.73■■■□□ 2.19
SH3TC1Q8TE82 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.73■■■□□ 2.19
SH3TC1Q8TE82 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.73■■■□□ 2.19
SH3TC1Q8TE82 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SH3TC1Q8TE82 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
SH3TC1Q8TE82 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SH3TC1Q8TE82 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
SH3TC1Q8TE82 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SH3TC1Q8TE82 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.72■■■□□ 2.19
SH3TC1Q8TE82 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.72■■■□□ 2.19
SH3TC1Q8TE82 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.72■■■□□ 2.19
SH3TC1Q8TE82 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SH3TC1Q8TE82 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SH3TC1Q8TE82 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
SH3TC1Q8TE82 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.71■■■□□ 2.19
SH3TC1Q8TE82 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
SH3TC1Q8TE82 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.71■■■□□ 2.19
SH3TC1Q8TE82 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
SH3TC1Q8TE82 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
SH3TC1Q8TE82 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.71■■■□□ 2.19
SH3TC1Q8TE82 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SH3TC1Q8TE82 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.7■■■□□ 2.19
SH3TC1Q8TE82 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.7■■■□□ 2.19
SH3TC1Q8TE82 AF213884.3-201ENST00000563833 479 ntBASIC28.7■■■□□ 2.19
SH3TC1Q8TE82 AC099791.2-201ENST00000605725 427 ntBASIC28.7■■■□□ 2.19
SH3TC1Q8TE82 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
SH3TC1Q8TE82 AL136967.2-201ENST00000623968 743 ntBASIC28.7■■■□□ 2.19
SH3TC1Q8TE82 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SH3TC1Q8TE82 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.7■■■□□ 2.18
SH3TC1Q8TE82 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 SERBP1P1-201ENST00000396021 1160 ntBASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 MIR939-201ENST00000401314 82 ntBASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 AP001330.3-201ENST00000520123 633 ntBASIC28.69■■■□□ 2.18
SH3TC1Q8TE82 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SH3TC1Q8TE82 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SH3TC1Q8TE82 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SH3TC1Q8TE82 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SH3TC1Q8TE82 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SH3TC1Q8TE82 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.68■■■□□ 2.18
SH3TC1Q8TE82 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
SH3TC1Q8TE82 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SH3TC1Q8TE82 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.67■■■□□ 2.18
SH3TC1Q8TE82 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
SH3TC1Q8TE82 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SH3TC1Q8TE82 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.67■■■□□ 2.18
SH3TC1Q8TE82 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SH3TC1Q8TE82 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.67■■■□□ 2.18
SH3TC1Q8TE82 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
SH3TC1Q8TE82 MIR4767-201ENST00000582827 78 ntBASIC28.67■■■□□ 2.18
SH3TC1Q8TE82 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
SH3TC1Q8TE82 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SH3TC1Q8TE82 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.66■■■□□ 2.18
SH3TC1Q8TE82 RARRES2P6-201ENST00000567333 442 ntBASIC28.66■■■□□ 2.18
SH3TC1Q8TE82 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
SH3TC1Q8TE82 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.66■■■□□ 2.18
SH3TC1Q8TE82 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
SH3TC1Q8TE82 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 C17orf82-201ENST00000623772 1530 ntBASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 AC105265.2-201ENST00000467189 838 ntBASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SH3TC1Q8TE82 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.64■■■□□ 2.18
SH3TC1Q8TE82 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SH3TC1Q8TE82 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SH3TC1Q8TE82 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SH3TC1Q8TE82 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SH3TC1Q8TE82 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SH3TC1Q8TE82 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SH3TC1Q8TE82 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.64■■■□□ 2.17
SH3TC1Q8TE82 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28.64■■■□□ 2.17
SH3TC1Q8TE82 PTCHD3P2-201ENST00000424937 1205 ntBASIC28.64■■■□□ 2.17
SH3TC1Q8TE82 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.64■■■□□ 2.17
SH3TC1Q8TE82 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SH3TC1Q8TE82 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SH3TC1Q8TE82 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms