Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 C1orf229-201ENST00000623686 2258 ntBASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV13-2A0A0B4J235 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-2A0A0B4J235 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV13-2A0A0B4J235 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV13-2A0A0B4J235 HLA-L-211ENST00000482052 1765 ntBASIC15.08■□□□□ 0.01
TRAV13-2A0A0B4J235 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.08■□□□□ 0.01
TRAV13-2A0A0B4J235 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 FOXO3B-201ENST00000395675 1928 ntBASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-2A0A0B4J235 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 AC097358.2-201ENST00000607541 1159 ntBASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC15.07■□□□□ 0
TRAV13-2A0A0B4J235 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 AC136428.2-201ENST00000563187 214 ntBASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 HNRNPLP2-201ENST00000568980 1570 ntBASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-2A0A0B4J235 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRAV13-2A0A0B4J235 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV13-2A0A0B4J235 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV13-2A0A0B4J235 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV13-2A0A0B4J235 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRAV13-2A0A0B4J235 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.05■□□□□ -0
TRAV13-2A0A0B4J235 DUSP8P3-201ENST00000399571 1760 ntBASIC15.05■□□□□ -0
TRAV13-2A0A0B4J235 ANOS2P-203ENST00000472227 1816 ntBASIC15.05■□□□□ -0
TRAV13-2A0A0B4J235 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRAV13-2A0A0B4J235 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV13-2A0A0B4J235 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms