Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-CO2P00403 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-CO2P00403 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-CO2P00403 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MT-CO2P00403 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.52■□□□□ 0.55
MT-CO2P00403 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.51■□□□□ 0.55
MT-CO2P00403 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO2P00403 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
MT-CO2P00403 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO2P00403 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MT-CO2P00403 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO2P00403 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO2P00403 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO2P00403 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO2P00403 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO2P00403 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO2P00403 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MT-CO2P00403 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO2P00403 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO2P00403 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
MT-CO2P00403 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
MT-CO2P00403 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO2P00403 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO2P00403 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO2P00403 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
MT-CO2P00403 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO2P00403 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO2P00403 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.5■□□□□ 0.55
MT-CO2P00403 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO2P00403 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MT-CO2P00403 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO2P00403 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.49■□□□□ 0.55
MT-CO2P00403 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO2P00403 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO2P00403 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO2P00403 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO2P00403 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO2P00403 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO2P00403 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO2P00403 DUSP8P5-201ENST00000422884 1815 ntBASIC18.49■□□□□ 0.55
MT-CO2P00403 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-CO2P00403 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MT-CO2P00403 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO2P00403 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO2P00403 KRT18P10-201ENST00000388836 1287 ntBASIC18.48■□□□□ 0.55
MT-CO2P00403 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MT-CO2P00403 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO2P00403 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO2P00403 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
MT-CO2P00403 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-CO2P00403 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-CO2P00403 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-CO2P00403 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.47■□□□□ 0.55
MT-CO2P00403 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MT-CO2P00403 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-CO2P00403 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-CO2P00403 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-CO2P00403 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.46■□□□□ 0.55
MT-CO2P00403 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.46■□□□□ 0.55
MT-CO2P00403 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-CO2P00403 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.46■□□□□ 0.55
MT-CO2P00403 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-CO2P00403 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-CO2P00403 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-CO2P00403 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.45■□□□□ 0.54
MT-CO2P00403 MIR6089-201ENST00000616698 64 ntBASIC18.45■□□□□ 0.54
MT-CO2P00403 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
MT-CO2P00403 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-CO2P00403 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-CO2P00403 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-CO2P00403 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO2P00403 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.44■□□□□ 0.54
MT-CO2P00403 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO2P00403 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO2P00403 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO2P00403 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.44■□□□□ 0.54
MT-CO2P00403 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO2P00403 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.44■□□□□ 0.54
MT-CO2P00403 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.44■□□□□ 0.54
MT-CO2P00403 AC133552.2-201ENST00000619106 1032 ntBASIC18.44■□□□□ 0.54
MT-CO2P00403 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO2P00403 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO2P00403 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.44■□□□□ 0.54
MT-CO2P00403 RNF126P1-201ENST00000567452 1320 ntBASIC18.44■□□□□ 0.54
MT-CO2P00403 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
MT-CO2P00403 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.44■□□□□ 0.54
MT-CO2P00403 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.44■□□□□ 0.54
MT-CO2P00403 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.43■□□□□ 0.54
MT-CO2P00403 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms