RNA–Protein interactions for RNA: ENST00000347609.8

LSR-201, Transcript of lipolysis stimulated lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LSR, Length 1,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSR-201ENST00000347609 NISCHQ9Y2I1 1504 aa49.35■■■■■ 5.49
LSR-201ENST00000347609 CCDC180Q9P1Z9 1646 aa42.55■■■■■ 4.4
LSR-201ENST00000347609 ZCCHC6Q5VYS8 1495 aaKnown RBP41.65■■■■■ 4.26
LSR-201ENST00000347609 SHROOM4Q9ULL8 1493 aa41.03■■■■■ 4.16
LSR-201ENST00000347609 DCAF1Q9Y4B6 1507 aa40.78■■■■■ 4.12
LSR-201ENST00000347609 DCAF8L2P0C7V8 631 aa40.58■■■■■ 4.09
LSR-201ENST00000347609 SUPT5HO00267 1087 aaKnown RBP39.97■■■■□ 3.99
LSR-201ENST00000347609 MYO15BQ96JP2 1530 aa39.94■■■■□ 3.98
LSR-201ENST00000347609 ABCC9O60706 1549 aa39.47■■■■□ 3.91
LSR-201ENST00000347609 NACADO15069 1562 aa39.44■■■■□ 3.9
LSR-201ENST00000347609 SCRIBQ14160 1630 aa39.34■■■■□ 3.89
LSR-201ENST00000347609 RB1CC1Q8TDY2 1594 aa38.89■■■■□ 3.82
LSR-201ENST00000347609 CHIC1Q5VXU3 224 aa38.73■■■■□ 3.79
LSR-201ENST00000347609 RSF1Q96T23 1441 aaPredicted RBP38.68■■■■□ 3.78
LSR-201ENST00000347609 CECR2Q9BXF3 1484 aa38.29■■■■□ 3.72
LSR-201ENST00000347609 MROH2BQ7Z745 1585 aa38.18■■■■□ 3.7
LSR-201ENST00000347609 UNC13AQ9UPW8 1703 aa38.1■■■■□ 3.69
LSR-201ENST00000347609 BAZ1AQ9NRL2 1556 aaPredicted RBP38.04■■■■□ 3.68
LSR-201ENST00000347609 WIZO95785 1651 aa37.92■■■■□ 3.66
LSR-201ENST00000347609 SMARCA4P51532 1647 aa37.74■■■■□ 3.63
LSR-201ENST00000347609 BICRAQ9NZM4 1560 aa37.68■■■■□ 3.62
LSR-201ENST00000347609 TOP2AP11388 1531 aaKnown RBP37.55■■■■□ 3.6
LSR-201ENST00000347609 TRIM41Q8WV44 630 aa37.5■■■■□ 3.59
LSR-201ENST00000347609 PABPN1Q86U42 306 aaKnown RBP eCLIP37.45■■■■□ 3.59
LSR-201ENST00000347609 LOC105371045A0A1W2PR82 267 aa37.3■■■■□ 3.56
LSR-201ENST00000347609 EIF4G1Q04637 1599 aaKnown RBP37.28■■■■□ 3.56
LSR-201ENST00000347609 SMARCA2P51531 1590 aa37.22■■■■□ 3.55
LSR-201ENST00000347609 PEG3Q9GZU2 1588 aa37.21■■■■□ 3.55
LSR-201ENST00000347609 CCDC88BA6NC98 1476 aa37.2■■■■□ 3.55
LSR-201ENST00000347609 ATAD2BQ9ULI0 1458 aa36.89■■■■□ 3.5
LSR-201ENST00000347609 FAM9AQ8IZU1 332 aaPredicted RBP36.86■■■■□ 3.49
LSR-201ENST00000347609 BAZ1BQ9UIG0 1483 aaKnown RBP36.77■■■■□ 3.48
LSR-201ENST00000347609 ABCC8Q09428 1581 aa36.73■■■■□ 3.47
LSR-201ENST00000347609 PCGF6Q9BYE7 350 aa36.63■■■■□ 3.45
LSR-201ENST00000347609 HMGXB3Q12766 1538 aa36.43■■■■□ 3.42
LSR-201ENST00000347609 NCAPD3P42695 1498 aa36.4■■■■□ 3.42
LSR-201ENST00000347609 WRNQ14191 1432 aaPredicted RBP eCLIP36.4■■■■□ 3.42
LSR-201ENST00000347609 EEA1Q15075 1411 aa36.38■■■■□ 3.41
LSR-201ENST00000347609 TRIM26Q12899 539 aaPredicted RBP36.38■■■■□ 3.41
LSR-201ENST00000347609 HRCP23327 699 aa36.35■■■■□ 3.41
LSR-201ENST00000347609 EHMT2Q96KQ7 1210 aa36.33■■■■□ 3.41
LSR-201ENST00000347609 SOGA1O94964 1423 aa36.25■■■■□ 3.39
LSR-201ENST00000347609 SYNJ1O43426 1573 aa36.18■■■■□ 3.38
LSR-201ENST00000347609 CSRNP3Q8WYN3 585 aa36.11■■■■□ 3.37
LSR-201ENST00000347609 RUSC2Q8N2Y8 1516 aa36.04■■■■□ 3.36
LSR-201ENST00000347609 TNIKQ9UKE5 1360 aa36■■■■□ 3.35
LSR-201ENST00000347609 TOP2BQ02880 1626 aa35.96■■■■□ 3.35
LSR-201ENST00000347609 GOLGA3Q08378 1498 aa35.93■■■■□ 3.34
LSR-201ENST00000347609 BIVM-ERCC5R4GMW8 1640 aa35.89■■■■□ 3.34
LSR-201ENST00000347609 CEP162Q5TB80 1403 aa35.88■■■■□ 3.34
LSR-201ENST00000347609 CFTRP13569 1480 aa35.87■■■■□ 3.33
LSR-201ENST00000347609 KIF21BO75037 1637 aa35.83■■■■□ 3.33
LSR-201ENST00000347609 CEP164Q9UPV0 1460 aa35.83■■■■□ 3.33
LSR-201ENST00000347609 UBTFP17480 764 aaKnown RBP35.77■■■■□ 3.32
LSR-201ENST00000347609 CC2D2AQ9P2K1 1620 aa35.72■■■■□ 3.31
LSR-201ENST00000347609 PRDM2Q13029 1718 aa35.7■■■■□ 3.31
LSR-201ENST00000347609 CUX1P39880 1505 aa35.64■■■■□ 3.3
LSR-201ENST00000347609 CADPSQ9ULU8 1353 aa35.57■■■■□ 3.28
LSR-201ENST00000347609 PPARGC1BQ86YN6 1023 aaKnown RBP35.49■■■■□ 3.27
LSR-201ENST00000347609 RAPGEF2Q9Y4G8 1499 aa35.47■■■■□ 3.27
LSR-201ENST00000347609 ZEB1P37275 1124 aaPredicted RBP35.46■■■■□ 3.27
LSR-201ENST00000347609 ERICH3Q5RHP9 1530 aa35.42■■■■□ 3.26
LSR-201ENST00000347609 CLIP1P30622 1438 aa35.4■■■■□ 3.26
LSR-201ENST00000347609 KIF27Q86VH2 1401 aa35.4■■■■□ 3.26
LSR-201ENST00000347609 PRXQ9BXM0 1461 aa35.37■■■■□ 3.25
LSR-201ENST00000347609 VPS8Q8N3P4 1428 aa35.21■■■■□ 3.23
LSR-201ENST00000347609 FANCD2Q9BXW9 1451 aa35.18■■■■□ 3.22
LSR-201ENST00000347609 FGD5Q6ZNL6 1462 aa35.12■■■■□ 3.21
LSR-201ENST00000347609 CUX2O14529 1486 aa35.09■■■■□ 3.21
LSR-201ENST00000347609 TTBK1Q5TCY1 1321 aaPredicted RBP35.03■■■■□ 3.2
LSR-201ENST00000347609 DNMBPQ6XZF7 1577 aa35.02■■■■□ 3.2
LSR-201ENST00000347609 LAMC3Q9Y6N6 1575 aa35■■■■□ 3.19
LSR-201ENST00000347609 IGF1RP08069 1367 aa34.97■■■■□ 3.19
LSR-201ENST00000347609 APLP2Q06481 763 aa34.97■■■■□ 3.19
LSR-201ENST00000347609 NESP48681 1621 aa34.95■■■■□ 3.18
LSR-201ENST00000347609 RANGAP1P46060 587 aaPredicted RBP34.92■■■■□ 3.18
LSR-201ENST00000347609 ARAP1Q96P48 1450 aa34.9■■■■□ 3.18
LSR-201ENST00000347609 TOPBP1Q92547 1522 aa34.9■■■■□ 3.18
LSR-201ENST00000347609 CARMIL1Q5VZK9 1371 aa34.83■■■■□ 3.17
LSR-201ENST00000347609 ABCA10Q8WWZ4 1543 aa34.82■■■■□ 3.16
LSR-201ENST00000347609 CCER1Q8TC90 406 aaPredicted RBP34.81■■■■□ 3.16
LSR-201ENST00000347609 POLA1P09884 1462 aaPredicted RBP34.8■■■■□ 3.16
LSR-201ENST00000347609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.8■■■■□ 3.16
LSR-201ENST00000347609 PDS5BQ9NTI5 1447 aa34.75■■■■□ 3.15
LSR-201ENST00000347609 DNAJC5BQ9UF47 199 aa34.73■■■■□ 3.15
LSR-201ENST00000347609 ARHGAP35Q9NRY4 1499 aa34.72■■■■□ 3.15
LSR-201ENST00000347609 RAD54L2Q9Y4B4 1467 aa34.72■■■■□ 3.15
LSR-201ENST00000347609 URB2Q14146 1524 aaKnown RBP34.68■■■■□ 3.14
LSR-201ENST00000347609 CUL7Q14999 1698 aa34.6■■■■□ 3.13
LSR-201ENST00000347609 WDR97A6NE52 1622 aa34.57■■■■□ 3.13
LSR-201ENST00000347609 KIF21AQ7Z4S6 1674 aa34.5■■■■□ 3.11
LSR-201ENST00000347609 HNRNPUL2Q1KMD3 747 aaKnown RBP34.44■■■■□ 3.1
LSR-201ENST00000347609 ABCA5Q8WWZ7 1642 aa34.43■■■■□ 3.1
LSR-201ENST00000347609 KANK4Q5T7N3 995 aaPredicted RBP34.41■■■■□ 3.1
LSR-201ENST00000347609 MAP3K1Q13233 1512 aa34.41■■■■□ 3.1
LSR-201ENST00000347609 FHAD1B1AJZ9 1412 aa34.37■■■■□ 3.09
LSR-201ENST00000347609 GAPVD1Q14C86 1478 aa34.35■■■■□ 3.09
LSR-201ENST00000347609 EFCAB5A4FU69 1503 aa34.35■■■■□ 3.09
LSR-201ENST00000347609 CTTNBP2Q8WZ74 1663 aa34.34■■■■□ 3.09
LSR-201ENST00000347609 RRBP1Q9P2E9 1410 aaKnown RBP34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms