RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 NISCHQ9Y2I1 1504 aa49.82■■■■■ 5.57
CNTFR-201ENST00000351266 CCDC180Q9P1Z9 1646 aa43.07■■■■■ 4.49
CNTFR-201ENST00000351266 ZCCHC6Q5VYS8 1495 aaKnown RBP42.01■■■■■ 4.32
CNTFR-201ENST00000351266 DCAF1Q9Y4B6 1507 aa41.22■■■■■ 4.19
CNTFR-201ENST00000351266 SHROOM4Q9ULL8 1493 aa41.17■■■■■ 4.18
CNTFR-201ENST00000351266 DCAF8L2P0C7V8 631 aa40.93■■■■■ 4.14
CNTFR-201ENST00000351266 MYO15BQ96JP2 1530 aa40.45■■■■■ 4.07
CNTFR-201ENST00000351266 SUPT5HO00267 1087 aaKnown RBP40.04■■■■■ 4
CNTFR-201ENST00000351266 ABCC9O60706 1549 aa40.03■■■■■ 4
CNTFR-201ENST00000351266 NACADO15069 1562 aa39.96■■■■□ 3.99
CNTFR-201ENST00000351266 SCRIBQ14160 1630 aa39.7■■■■□ 3.95
CNTFR-201ENST00000351266 RB1CC1Q8TDY2 1594 aa39.43■■■■□ 3.9
CNTFR-201ENST00000351266 RSF1Q96T23 1441 aaPredicted RBP38.95■■■■□ 3.83
CNTFR-201ENST00000351266 CHIC1Q5VXU3 224 aa38.73■■■■□ 3.79
CNTFR-201ENST00000351266 CECR2Q9BXF3 1484 aa38.61■■■■□ 3.77
CNTFR-201ENST00000351266 UNC13AQ9UPW8 1703 aa38.56■■■■□ 3.76
CNTFR-201ENST00000351266 MROH2BQ7Z745 1585 aa38.49■■■■□ 3.75
CNTFR-201ENST00000351266 BAZ1AQ9NRL2 1556 aaPredicted RBP38.43■■■■□ 3.74
CNTFR-201ENST00000351266 WIZO95785 1651 aa38.21■■■■□ 3.71
CNTFR-201ENST00000351266 BICRAQ9NZM4 1560 aa38.16■■■■□ 3.7
CNTFR-201ENST00000351266 SMARCA4P51532 1647 aa38.11■■■■□ 3.69
CNTFR-201ENST00000351266 PABPN1Q86U42 306 aaKnown RBP eCLIP37.91■■■■□ 3.66
CNTFR-201ENST00000351266 TOP2AP11388 1531 aaKnown RBP37.88■■■■□ 3.65
CNTFR-201ENST00000351266 PEG3Q9GZU2 1588 aa37.63■■■■□ 3.62
CNTFR-201ENST00000351266 TRIM41Q8WV44 630 aa37.63■■■■□ 3.62
CNTFR-201ENST00000351266 SMARCA2P51531 1590 aa37.52■■■■□ 3.6
CNTFR-201ENST00000351266 EIF4G1Q04637 1599 aaKnown RBP37.5■■■■□ 3.59
CNTFR-201ENST00000351266 CCDC88BA6NC98 1476 aa37.49■■■■□ 3.59
CNTFR-201ENST00000351266 ATAD2BQ9ULI0 1458 aa37.31■■■■□ 3.56
CNTFR-201ENST00000351266 LOC105371045A0A1W2PR82 267 aa37.25■■■■□ 3.55
CNTFR-201ENST00000351266 BAZ1BQ9UIG0 1483 aaKnown RBP37.17■■■■□ 3.54
CNTFR-201ENST00000351266 ABCC8Q09428 1581 aa36.93■■■■□ 3.5
CNTFR-201ENST00000351266 FAM9AQ8IZU1 332 aaPredicted RBP36.91■■■■□ 3.5
CNTFR-201ENST00000351266 HMGXB3Q12766 1538 aa36.89■■■■□ 3.5
CNTFR-201ENST00000351266 NCAPD3P42695 1498 aa36.88■■■■□ 3.49
CNTFR-201ENST00000351266 WRNQ14191 1432 aaPredicted RBP eCLIP36.67■■■■□ 3.46
CNTFR-201ENST00000351266 EEA1Q15075 1411 aa36.62■■■■□ 3.45
CNTFR-201ENST00000351266 SYNJ1O43426 1573 aa36.42■■■■□ 3.42
CNTFR-201ENST00000351266 SOGA1O94964 1423 aa36.42■■■■□ 3.42
CNTFR-201ENST00000351266 PCGF6Q9BYE7 350 aa36.42■■■■□ 3.42
CNTFR-201ENST00000351266 EHMT2Q96KQ7 1210 aa36.33■■■■□ 3.41
CNTFR-201ENST00000351266 CSRNP3Q8WYN3 585 aa36.3■■■■□ 3.4
CNTFR-201ENST00000351266 TRIM26Q12899 539 aaPredicted RBP36.28■■■■□ 3.4
CNTFR-201ENST00000351266 CFTRP13569 1480 aa36.28■■■■□ 3.4
CNTFR-201ENST00000351266 TOP2BQ02880 1626 aa36.25■■■■□ 3.39
CNTFR-201ENST00000351266 CC2D2AQ9P2K1 1620 aa36.23■■■■□ 3.39
CNTFR-201ENST00000351266 RUSC2Q8N2Y8 1516 aa36.2■■■■□ 3.39
CNTFR-201ENST00000351266 BIVM-ERCC5R4GMW8 1640 aa36.19■■■■□ 3.38
CNTFR-201ENST00000351266 TNIKQ9UKE5 1360 aa36.15■■■■□ 3.38
CNTFR-201ENST00000351266 GOLGA3Q08378 1498 aa36.11■■■■□ 3.37
CNTFR-201ENST00000351266 PRDM2Q13029 1718 aa36.09■■■■□ 3.37
CNTFR-201ENST00000351266 HRCP23327 699 aa36.04■■■■□ 3.36
CNTFR-201ENST00000351266 CEP164Q9UPV0 1460 aa36.04■■■■□ 3.36
CNTFR-201ENST00000351266 KIF21BO75037 1637 aa36.03■■■■□ 3.36
CNTFR-201ENST00000351266 CADPSQ9ULU8 1353 aa36■■■■□ 3.35
CNTFR-201ENST00000351266 CEP162Q5TB80 1403 aa35.98■■■■□ 3.35
CNTFR-201ENST00000351266 CUX1P39880 1505 aa35.94■■■■□ 3.34
CNTFR-201ENST00000351266 UBTFP17480 764 aaKnown RBP35.92■■■■□ 3.34
CNTFR-201ENST00000351266 KIF27Q86VH2 1401 aa35.7■■■■□ 3.31
CNTFR-201ENST00000351266 ERICH3Q5RHP9 1530 aa35.66■■■■□ 3.3
CNTFR-201ENST00000351266 RAPGEF2Q9Y4G8 1499 aa35.65■■■■□ 3.3
CNTFR-201ENST00000351266 PRXQ9BXM0 1461 aa35.61■■■■□ 3.29
CNTFR-201ENST00000351266 FANCD2Q9BXW9 1451 aa35.59■■■■□ 3.29
CNTFR-201ENST00000351266 CLIP1P30622 1438 aa35.54■■■■□ 3.28
CNTFR-201ENST00000351266 LAMC3Q9Y6N6 1575 aa35.5■■■■□ 3.27
CNTFR-201ENST00000351266 FGD5Q6ZNL6 1462 aa35.45■■■■□ 3.27
CNTFR-201ENST00000351266 PPARGC1BQ86YN6 1023 aaKnown RBP35.42■■■■□ 3.26
CNTFR-201ENST00000351266 DNMBPQ6XZF7 1577 aa35.41■■■■□ 3.26
CNTFR-201ENST00000351266 CUX2O14529 1486 aa35.39■■■■□ 3.26
CNTFR-201ENST00000351266 NESP48681 1621 aa35.35■■■■□ 3.25
CNTFR-201ENST00000351266 VPS8Q8N3P4 1428 aa35.35■■■■□ 3.25
CNTFR-201ENST00000351266 ZEB1P37275 1124 aaPredicted RBP35.32■■■■□ 3.25
CNTFR-201ENST00000351266 TOPBP1Q92547 1522 aa35.28■■■■□ 3.24
CNTFR-201ENST00000351266 IGF1RP08069 1367 aa35.25■■■■□ 3.23
CNTFR-201ENST00000351266 PDS5BQ9NTI5 1447 aa35.24■■■■□ 3.23
CNTFR-201ENST00000351266 ABCA10Q8WWZ4 1543 aa35.18■■■■□ 3.22
CNTFR-201ENST00000351266 POLA1P09884 1462 aaPredicted RBP35.16■■■■□ 3.22
CNTFR-201ENST00000351266 CARMIL1Q5VZK9 1371 aa35.12■■■■□ 3.21
CNTFR-201ENST00000351266 APLP2Q06481 763 aa35.1■■■■□ 3.21
CNTFR-201ENST00000351266 URB2Q14146 1524 aaKnown RBP35.07■■■■□ 3.2
CNTFR-201ENST00000351266 ARAP1Q96P48 1450 aa35.04■■■■□ 3.2
CNTFR-201ENST00000351266 RAD54L2Q9Y4B4 1467 aa35.04■■■■□ 3.2
CNTFR-201ENST00000351266 RANGAP1P46060 587 aaPredicted RBP35.04■■■■□ 3.2
CNTFR-201ENST00000351266 TTBK1Q5TCY1 1321 aaPredicted RBP35■■■■□ 3.19
CNTFR-201ENST00000351266 DNAJC5BQ9UF47 199 aa34.99■■■■□ 3.19
CNTFR-201ENST00000351266 CUL7Q14999 1698 aa34.93■■■■□ 3.18
CNTFR-201ENST00000351266 KIF21AQ7Z4S6 1674 aa34.93■■■■□ 3.18
CNTFR-201ENST00000351266 WDR97A6NE52 1622 aa34.93■■■■□ 3.18
CNTFR-201ENST00000351266 ARHGAP35Q9NRY4 1499 aa34.91■■■■□ 3.18
CNTFR-201ENST00000351266 ABCA5Q8WWZ7 1642 aa34.79■■■■□ 3.16
CNTFR-201ENST00000351266 CCER1Q8TC90 406 aaPredicted RBP34.71■■■■□ 3.15
CNTFR-201ENST00000351266 GAPVD1Q14C86 1478 aa34.71■■■■□ 3.15
CNTFR-201ENST00000351266 MRC2Q9UBG0 1479 aa34.71■■■■□ 3.15
CNTFR-201ENST00000351266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.68■■■■□ 3.14
CNTFR-201ENST00000351266 TARBP1Q13395 1621 aaKnown RBP34.66■■■■□ 3.14
CNTFR-201ENST00000351266 TDRD9Q8NDG6 1382 aaKnown RBP34.65■■■■□ 3.14
CNTFR-201ENST00000351266 EFCAB5A4FU69 1503 aa34.63■■■■□ 3.13
CNTFR-201ENST00000351266 CTTNBP2Q8WZ74 1663 aa34.62■■■■□ 3.13
CNTFR-201ENST00000351266 MAP3K1Q13233 1512 aa34.62■■■■□ 3.13
CNTFR-201ENST00000351266 FHAD1B1AJZ9 1412 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms