Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CSMD1Q96PZ7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSMD1Q96PZ7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CSMD1Q96PZ7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSMD1Q96PZ7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSMD1Q96PZ7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.13■□□□□ 0.81
CSMD1Q96PZ7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSMD1Q96PZ7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSMD1Q96PZ7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSMD1Q96PZ7 CA15P2-201ENST00000611168 834 ntBASIC20.13■□□□□ 0.81
CSMD1Q96PZ7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSMD1Q96PZ7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSMD1Q96PZ7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.13■□□□□ 0.81
CSMD1Q96PZ7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSMD1Q96PZ7 SRD5A1P1-201ENST00000442297 786 ntBASIC20.13■□□□□ 0.81
CSMD1Q96PZ7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.13■□□□□ 0.81
CSMD1Q96PZ7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSMD1Q96PZ7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CSMD1Q96PZ7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.12■□□□□ 0.81
CSMD1Q96PZ7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.12■□□□□ 0.81
CSMD1Q96PZ7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CSMD1Q96PZ7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSMD1Q96PZ7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSMD1Q96PZ7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD1Q96PZ7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.11■□□□□ 0.81
CSMD1Q96PZ7 RAP2CP1-201ENST00000605103 478 ntBASIC20.11■□□□□ 0.81
CSMD1Q96PZ7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.11■□□□□ 0.81
CSMD1Q96PZ7 DRD5P2-201ENST00000421395 2012 ntBASIC20.11■□□□□ 0.81
CSMD1Q96PZ7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD1Q96PZ7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD1Q96PZ7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.11■□□□□ 0.81
CSMD1Q96PZ7 KRT18P5-201ENST00000436075 1291 ntBASIC20.1■□□□□ 0.81
CSMD1Q96PZ7 MIR4767-201ENST00000582827 78 ntBASIC20.1■□□□□ 0.81
CSMD1Q96PZ7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.1■□□□□ 0.81
CSMD1Q96PZ7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSMD1Q96PZ7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSMD1Q96PZ7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSMD1Q96PZ7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSMD1Q96PZ7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSMD1Q96PZ7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CSMD1Q96PZ7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CSMD1Q96PZ7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CSMD1Q96PZ7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.08■□□□□ 0.81
CSMD1Q96PZ7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CSMD1Q96PZ7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CSMD1Q96PZ7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.08■□□□□ 0.8
CSMD1Q96PZ7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSMD1Q96PZ7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CSMD1Q96PZ7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSMD1Q96PZ7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CSMD1Q96PZ7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSMD1Q96PZ7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSMD1Q96PZ7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSMD1Q96PZ7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSMD1Q96PZ7 AC027682.1-201ENST00000562846 899 ntBASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 YBX1P1-201ENST00000445822 960 ntBASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 DUX4L2-201ENST00000561772 1275 ntBASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 SNX5-217ENST00000606557 1087 ntBASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 DUX4L6-201ENST00000626483 1275 ntBASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 DUX4L1-201ENST00000627662 1275 ntBASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 DUX4L8-201ENST00000629013 1275 ntBASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 DUX4L3-201ENST00000630187 1275 ntBASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 DUX4L7-201ENST00000630678 1275 ntBASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 DUX4L5-201ENST00000630834 1275 ntBASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSMD1Q96PZ7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.05■□□□□ 0.8
CSMD1Q96PZ7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.05■□□□□ 0.8
CSMD1Q96PZ7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.05■□□□□ 0.8
CSMD1Q96PZ7 AC004911.1-201ENST00000416316 871 ntBASIC20.05■□□□□ 0.8
CSMD1Q96PZ7 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.05■□□□□ 0.8
CSMD1Q96PZ7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSMD1Q96PZ7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSMD1Q96PZ7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CSMD1Q96PZ7 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.05■□□□□ 0.8
CSMD1Q96PZ7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSMD1Q96PZ7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.04■□□□□ 0.8
CSMD1Q96PZ7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSMD1Q96PZ7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.04■□□□□ 0.8
CSMD1Q96PZ7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CSMD1Q96PZ7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.04■□□□□ 0.8
CSMD1Q96PZ7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CSMD1Q96PZ7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CSMD1Q96PZ7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSMD1Q96PZ7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CSMD1Q96PZ7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSMD1Q96PZ7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.03■□□□□ 0.8
CSMD1Q96PZ7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CSMD1Q96PZ7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.03■□□□□ 0.8
CSMD1Q96PZ7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSMD1Q96PZ7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.03■□□□□ 0.8
CSMD1Q96PZ7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.02■□□□□ 0.8
CSMD1Q96PZ7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CSMD1Q96PZ7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD1Q96PZ7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.01■□□□□ 0.79
CSMD1Q96PZ7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSMD1Q96PZ7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.01■□□□□ 0.79
CSMD1Q96PZ7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms