Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.271e-6■■■□□ 18.3
FUBP3Q96I24 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.722e-8■■■□□ 18.3
FUBP3Q96I24 SNRPE-206ENST00000483099 967 ntTSL 221.03■□□□□ 0.962e-8■■■□□ 18.3
FUBP3Q96I24 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.22e-8■■■□□ 18.3
FUBP3Q96I24 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15□□□□□ -0.012e-8■■■□□ 18.3
FUBP3Q96I24 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.112e-8■■■□□ 18.3
FUBP3Q96I24 PCNX4-204ENST00000406949 3513 ntTSL 2 BASIC11.89□□□□□ -0.512e-8■■■□□ 18.3
FUBP3Q96I24 MTSS1-205ENST00000518547 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.643e-8■■■□□ 18.3
FUBP3Q96I24 MTSS1-202ENST00000378017 4458 ntTSL 1 (best) BASIC10.27□□□□□ -0.773e-8■■■□□ 18.3
FUBP3Q96I24 SNRPE-202ENST00000414487 942 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.922e-8■■■□□ 18.3
FUBP3Q96I24 SNRPE-205ENST00000475035 532 ntTSL 1 (best)9.27□□□□□ -0.932e-8■■■□□ 18.3
FUBP3Q96I24 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC9.09□□□□□ -0.952e-8■■■□□ 18.3
FUBP3Q96I24 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.982e-8■■■□□ 18.3
FUBP3Q96I24 PCNX4-210ENST00000555740 2545 ntTSL 28.23□□□□□ -1.092e-8■■■□□ 18.3
FUBP3Q96I24 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.19□□□□□ -1.422e-8■■■□□ 18.3
FUBP3Q96I24 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.432e-8■■■□□ 18.3
FUBP3Q96I24 SNRPE-204ENST00000470492 478 ntTSL 35.52□□□□□ -1.532e-8■■■□□ 18.3
FUBP3Q96I24 ITSN2-206ENST00000416160 3634 ntTSL 54.7□□□□□ -1.662e-8■■■□□ 18.3
FUBP3Q96I24 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.062e-8■■■□□ 18.3
FUBP3Q96I24 ATP13A3-202ENST00000429136 3729 ntTSL 1 (best)5.47□□□□□ -1.537e-7■■■□□ 18.3
FUBP3Q96I24 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.65□□□□□ -1.677e-7■■■□□ 18.3
FUBP3Q96I24 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.847e-7■■■□□ 18.3
FUBP3Q96I24 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.087e-7■■■□□ 18.3
FUBP3Q96I24 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.87■□□□□ 0.291e-40■■■□□ 18.2
FUBP3Q96I24 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.29■■□□□ 1.484e-7■■■□□ 18.2
FUBP3Q96I24 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.98■□□□□ 0.954e-7■■■□□ 18.2
FUBP3Q96I24 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.384e-7■■■□□ 18.2
FUBP3Q96I24 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.344e-7■■■□□ 18.2
FUBP3Q96I24 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.143e-9■■■□□ 18.1
FUBP3Q96I24 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.6■□□□□ 0.737e-7■■■□□ 18.1
FUBP3Q96I24 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.557e-7■■■□□ 18.1
FUBP3Q96I24 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.147e-7■■■□□ 18.1
FUBP3Q96I24 Z84485.1-201ENST00000526611 587 ntTSL 313.71□□□□□ -0.217e-7■■■□□ 18.1
FUBP3Q96I24 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.287e-7■■■□□ 18.1
FUBP3Q96I24 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.317e-7■■■□□ 18.1
FUBP3Q96I24 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC12.32□□□□□ -0.447e-7■■■□□ 18.1
FUBP3Q96I24 SLC33A1-201ENST00000359479 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.667e-7■■■□□ 18.1
FUBP3Q96I24 CDH1-214ENST00000621016 3304 ntTSL 5 BASIC10.41□□□□□ -0.747e-7■■■□□ 18.1
FUBP3Q96I24 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.967e-7■■■□□ 18.1
FUBP3Q96I24 PLCB1-220ENST00000630757 857 ntTSL 37.99□□□□□ -1.137e-7■■■□□ 18.1
FUBP3Q96I24 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.18□□□□□ -1.267e-7■■■□□ 18.1
FUBP3Q96I24 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.357e-7■■■□□ 18.1
FUBP3Q96I24 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.417e-7■■■□□ 18.1
FUBP3Q96I24 CCT8P1-201ENST00000413611 1657 ntBASIC6.22□□□□□ -1.417e-7■■■□□ 18.1
FUBP3Q96I24 SLC33A1-205ENST00000475842 1060 ntTSL 35.75□□□□□ -1.497e-7■■■□□ 18.1
FUBP3Q96I24 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.857e-7■■■□□ 18.1
FUBP3Q96I24 PLCB1-229ENST00000637204 100 ntTSL 53.49□□□□□ -1.857e-7■■■□□ 18.1
FUBP3Q96I24 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.3■■■■□ 3.086e-10■■■□□ 18.1
FUBP3Q96I24 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.336e-10■■■□□ 18.1
FUBP3Q96I24 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.13■□□□□ 0.176e-10■■■□□ 18.1
FUBP3Q96I24 PHF10-204ENST00000480008 4285 ntTSL 1 (best)16.12■□□□□ 0.176e-10■■■□□ 18.1
FUBP3Q96I24 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.116e-10■■■□□ 18.1
FUBP3Q96I24 TMEM189-205ENST00000453505 2028 ntTSL 1 (best)20.47■□□□□ 0.872e-7■■■□□ 18.1
FUBP3Q96I24 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.812e-7■■■□□ 18.1
FUBP3Q96I24 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.262e-7■■■□□ 18.1
FUBP3Q96I24 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.38■□□□□ 0.052e-7■■■□□ 18.1
FUBP3Q96I24 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.182e-7■■■□□ 18.1
FUBP3Q96I24 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.384e-8■■■□□ 18
FUBP3Q96I24 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.664e-8■■■□□ 18
FUBP3Q96I24 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.023e-8■■■□□ 18
FUBP3Q96I24 SAR1B-201ENST00000402673 6682 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.671e-6■■■□□ 18
FUBP3Q96I24 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.042e-7■■■□□ 18
FUBP3Q96I24 MAP3K1-202ENST00000469188 3713 ntTSL 1 (best)2.58□□□□□ -22e-7■■■□□ 18
FUBP3Q96I24 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.554e-13■■■□□ 17.9
FUBP3Q96I24 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.554e-13■■■□□ 17.9
FUBP3Q96I24 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.46■□□□□ 0.554e-13■■■□□ 17.9
FUBP3Q96I24 TM2D1-206ENST00000472357 744 ntTSL 25.78□□□□□ -1.484e-13■■■□□ 17.9
FUBP3Q96I24 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.469e-7■■■□□ 17.9
FUBP3Q96I24 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.15e-7■■■□□ 17.9
FUBP3Q96I24 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.25e-7■■■□□ 17.9
FUBP3Q96I24 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.173e-18■■■□□ 17.9
FUBP3Q96I24 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.253e-18■■■□□ 17.9
FUBP3Q96I24 SMARCA1-205ENST00000617310 4291 ntTSL 210.21□□□□□ -0.783e-7■■■□□ 17.9
FUBP3Q96I24 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.983e-7■■■□□ 17.9
FUBP3Q96I24 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.13e-7■■■□□ 17.9
FUBP3Q96I24 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.634e-7■■■□□ 17.8
FUBP3Q96I24 AK3-204ENST00000611749 4029 ntTSL 4 BASIC10.16□□□□□ -0.784e-7■■■□□ 17.8
FUBP3Q96I24 GBE1-201ENST00000429644 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.481e-7■■■□□ 17.8
FUBP3Q96I24 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.15□□□□□ -1.422e-9■■■□□ 17.8
FUBP3Q96I24 HNRNPR-213ENST00000641107 646 nt15.97■□□□□ 0.153e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPR-209ENST00000476660 1637 ntTSL 1 (best)15.28■□□□□ 0.043e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPR-203ENST00000374616 2691 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.443e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPR-202ENST00000374612 2694 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.493e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPR-201ENST00000302271 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.63e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.19□□□□□ -1.263e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPDL-209ENST00000630114 1433 ntTSL 521.99■■□□□ 1.113e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPDL-203ENST00000502762 2356 ntTSL 1 (best)20.78■□□□□ 0.923e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.563e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPDL-202ENST00000349655 1402 ntTSL 1 (best)18.4■□□□□ 0.543e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.463e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.063e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.68□□□□□ -0.223e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.653e-11■■■□□ 17.8
FUBP3Q96I24 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.023e-11■■■□□ 17.8
FUBP3Q96I24 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.144e-6■■■□□ 17.7
FUBP3Q96I24 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.2□□□□□ -0.144e-6■■■□□ 17.7
FUBP3Q96I24 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.814e-6■■■□□ 17.7
FUBP3Q96I24 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.261e-14■■■□□ 17.7
FUBP3Q96I24 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.37e-7■■■□□ 17.7
FUBP3Q96I24 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.137e-7■■■□□ 17.7
Retrieved 100 of 4,568 protein–RNA pairs in 352.2 ms