RNA–Protein interactions for RNA: ENST00000317623.8

PCNX4-201, Transcript of pecanex 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCNX4, Length 17,339 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-201ENST00000317623 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.65
PCNX4-201ENST00000317623 MYT1Q01538 1121 aa10.94□□□□□ -0.66
PCNX4-201ENST00000317623 ERICH6Q7L0X2 663 aa10.42□□□□□ -0.74
PCNX4-201ENST00000317623 CENPBP07199 599 aaPredicted RBP10.41□□□□□ -0.74
PCNX4-201ENST00000317623 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
PCNX4-201ENST00000317623 CCER1Q8TC90 406 aaPredicted RBP10.35□□□□□ -0.75
PCNX4-201ENST00000317623 SUPT5HO00267 1087 aaKnown RBP10.29□□□□□ -0.76
PCNX4-201ENST00000317623 PCGF6Q9BYE7 350 aa10.29□□□□□ -0.76
PCNX4-201ENST00000317623 ZEB1P37275 1124 aaPredicted RBP10.26□□□□□ -0.77
PCNX4-201ENST00000317623 TTBK1Q5TCY1 1321 aaPredicted RBP10.13□□□□□ -0.79
PCNX4-201ENST00000317623 NEFLP07196 543 aa10.07□□□□□ -0.8
PCNX4-201ENST00000317623 EHMT2Q96KQ7 1210 aa10.04□□□□□ -0.8
PCNX4-201ENST00000317623 YTHDC1Q96MU7 727 aaKnown RBP9.99□□□□□ -0.81
PCNX4-201ENST00000317623 APLP2Q06481 763 aa9.97□□□□□ -0.81
PCNX4-201ENST00000317623 HRCP23327 699 aa9.96□□□□□ -0.81
PCNX4-201ENST00000317623 SHROOM4Q9ULL8 1493 aa9.86□□□□□ -0.83
PCNX4-201ENST00000317623 DAXXQ9UER7 740 aaPredicted RBP9.84□□□□□ -0.83
PCNX4-201ENST00000317623 RTL5Q5HYW3 569 aaPredicted RBP9.77□□□□□ -0.85
PCNX4-201ENST00000317623 FAM9AQ8IZU1 332 aaPredicted RBP9.74□□□□□ -0.85
PCNX4-201ENST00000317623 TRIM26Q12899 539 aaPredicted RBP9.73□□□□□ -0.85
PCNX4-201ENST00000317623 PPARGC1BQ86YN6 1023 aaKnown RBP9.67□□□□□ -0.86
PCNX4-201ENST00000317623 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
PCNX4-201ENST00000317623 ZNF316A6NFI3 1004 aaPredicted RBP9.59□□□□□ -0.87
PCNX4-201ENST00000317623 DIEXFQ68CQ4 756 aaKnown RBP9.59□□□□□ -0.87
PCNX4-201ENST00000317623 GLIPR1L2Q4G1C9 344 aa9.53□□□□□ -0.88
PCNX4-201ENST00000317623 TRIM41Q8WV44 630 aa9.51□□□□□ -0.89
PCNX4-201ENST00000317623 EIF5BO60841 1220 aaKnown RBP9.5□□□□□ -0.89
PCNX4-201ENST00000317623 CDK11AQ9UQ88 783 aaPredicted RBP9.5□□□□□ -0.89
PCNX4-201ENST00000317623 ACIN1Q9UKV3 1341 aaKnown RBP9.49□□□□□ -0.89
PCNX4-201ENST00000317623 RANGAP1P46060 587 aaPredicted RBP9.46□□□□□ -0.9
PCNX4-201ENST00000317623 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
PCNX4-201ENST00000317623 UBTFP17480 764 aaKnown RBP9.44□□□□□ -0.9
PCNX4-201ENST00000317623 BCANQ96GW7 911 aa9.44□□□□□ -0.9
PCNX4-201ENST00000317623 NISCHQ9Y2I1 1504 aa9.39□□□□□ -0.91
PCNX4-201ENST00000317623 CLSPNQ9HAW4 1339 aa9.39□□□□□ -0.91
PCNX4-201ENST00000317623 ATP1B4Q9UN42 357 aaPredicted RBP9.35□□□□□ -0.91
PCNX4-201ENST00000317623 LOC105371045A0A1W2PR82 267 aa9.34□□□□□ -0.91
PCNX4-201ENST00000317623 ANP32AP39687 249 aaKnown RBP9.33□□□□□ -0.92
PCNX4-201ENST00000317623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.32□□□□□ -0.92
PCNX4-201ENST00000317623 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
PCNX4-201ENST00000317623 SCAF1Q9H7N4 1312 aaKnown RBP9.29□□□□□ -0.92
PCNX4-201ENST00000317623 HNRNPUL2Q1KMD3 747 aaKnown RBP9.28□□□□□ -0.92
PCNX4-201ENST00000317623 BCL11AQ9H165 835 aa9.22□□□□□ -0.93
PCNX4-201ENST00000317623 CNGB1Q14028 1251 aaPredicted RBP9.22□□□□□ -0.93
PCNX4-201ENST00000317623 ANP32CO43423 234 aa9.21□□□□□ -0.93
PCNX4-201ENST00000317623 NBR1Q14596 966 aa9.21□□□□□ -0.94
PCNX4-201ENST00000317623 ANP32BQ92688 251 aaKnown RBP9.21□□□□□ -0.94
PCNX4-201ENST00000317623 CHIC1Q5VXU3 224 aa9.2□□□□□ -0.94
PCNX4-201ENST00000317623 ITGAEP38570 1179 aa9.2□□□□□ -0.94
PCNX4-201ENST00000317623 ANP32EQ9BTT0 268 aa9.19□□□□□ -0.94
PCNX4-201ENST00000317623 NEUROD1Q13562 356 aa9.17□□□□□ -0.94
PCNX4-201ENST00000317623 NPM2Q86SE8 214 aaKnown RBP9.16□□□□□ -0.94
PCNX4-201ENST00000317623 FKBP8Q14318 412 aa9.14□□□□□ -0.95
PCNX4-201ENST00000317623 TNNT2P45379 298 aaPredicted RBP9.14□□□□□ -0.95
PCNX4-201ENST00000317623 ZBTB47Q9UFB7 747 aaPredicted RBP9.13□□□□□ -0.95
PCNX4-201ENST00000317623 ERICH6BQ5W0A0 696 aa9.02□□□□□ -0.97
PCNX4-201ENST00000317623 CANXP27824 592 aaKnown RBP9□□□□□ -0.97
PCNX4-201ENST00000317623 HSP90AA1P07900 732 aaKnown RBP9□□□□□ -0.97
PCNX4-201ENST00000317623 SLC4A1APQ9BWU0 796 aaKnown RBP8.98□□□□□ -0.97
PCNX4-201ENST00000317623 UPF2Q9HAU5 1272 aaKnown RBP8.98□□□□□ -0.97
PCNX4-201ENST00000317623 ARXQ96QS3 562 aa8.97□□□□□ -0.97
PCNX4-201ENST00000317623 NAP1L5Q96NT1 182 aaPredicted RBP8.96□□□□□ -0.97
PCNX4-201ENST00000317623 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.97
PCNX4-201ENST00000317623 CCDC136Q96JN2 1154 aa8.95□□□□□ -0.98
PCNX4-201ENST00000317623 DDRGK1Q96HY6 314 aa8.95□□□□□ -0.98
PCNX4-201ENST00000317623 NEFMP07197 916 aa8.94□□□□□ -0.98
PCNX4-201ENST00000317623 DEKP35659 375 aaKnown RBP8.93□□□□□ -0.98
PCNX4-201ENST00000317623 NCLP19338 710 aaKnown RBP8.93□□□□□ -0.98
PCNX4-201ENST00000317623 MIER1Q8N108 512 aa8.93□□□□□ -0.98
PCNX4-201ENST00000317623 FAM50AQ14320 339 aaKnown RBP8.93□□□□□ -0.98
PCNX4-201ENST00000317623 TRIM44Q96DX7 344 aaPredicted RBP8.92□□□□□ -0.98
PCNX4-201ENST00000317623 HNRNPUQ00839 825 aaKnown RBP eCLIP8.9□□□□□ -0.98
PCNX4-201ENST00000317623 CDK11BP21127 795 aaKnown RBP8.89□□□□□ -0.99
PCNX4-201ENST00000317623 TRIM52Q96A61 297 aa8.89□□□□□ -0.99
PCNX4-201ENST00000317623 BECN1Q14457 450 aa8.88□□□□□ -0.99
PCNX4-201ENST00000317623 NOP58Q9Y2X3 529 aaKnown RBP8.88□□□□□ -0.99
PCNX4-201ENST00000317623 PPM1GO15355 546 aaPredicted RBP8.86□□□□□ -0.99
PCNX4-201ENST00000317623 DDX10Q13206 875 aaKnown RBP8.84□□□□□ -0.99
PCNX4-201ENST00000317623 IRX6P78412 446 aaPredicted RBP8.84□□□□□ -0.99
PCNX4-201ENST00000317623 CSRNP3Q8WYN3 585 aa8.84□□□□□ -0.99
PCNX4-201ENST00000317623 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.83□□□□□ -1
PCNX4-201ENST00000317623 ZNF326Q5BKZ1 582 aaKnown RBP8.82□□□□□ -1
PCNX4-201ENST00000317623 LAS1LQ9Y4W2 734 aaKnown RBP8.81□□□□□ -1
PCNX4-201ENST00000317623 PTMAP06454 111 aaKnown RBP8.81□□□□□ -1
PCNX4-201ENST00000317623 DCAF1Q9Y4B6 1507 aa8.8□□□□□ -1
PCNX4-201ENST00000317623 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.8□□□□□ -1
PCNX4-201ENST00000317623 FAM9BQ8IZU0 186 aa8.8□□□□□ -1
PCNX4-201ENST00000317623 GOLGA6L22H0YM25 854 aa8.78□□□□□ -1
PCNX4-201ENST00000317623 SUPT16HQ9Y5B9 1047 aaKnown RBP8.78□□□□□ -1
PCNX4-201ENST00000317623 DNTTIP2Q5QJE6 756 aaKnown RBP8.77□□□□□ -1.01
PCNX4-201ENST00000317623 L1TD1Q5T7N2 865 aaKnown RBP8.76□□□□□ -1.01
PCNX4-201ENST00000317623 RBM19Q9Y4C8 960 aaKnown RBP8.75□□□□□ -1.01
PCNX4-201ENST00000317623 PPP4R2Q9NY27 417 aa8.74□□□□□ -1.01
PCNX4-201ENST00000317623 AMER1Q5JTC6 1135 aaPredicted RBP8.74□□□□□ -1.01
PCNX4-201ENST00000317623 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
PCNX4-201ENST00000317623 TMC1Q8TDI8 760 aa8.73□□□□□ -1.01
PCNX4-201ENST00000317623 MRS2Q9HD23 443 aa8.7□□□□□ -1.02
PCNX4-201ENST00000317623 SALL2Q9Y467 1007 aaPredicted RBP8.69□□□□□ -1.02
PCNX4-201ENST00000317623 PNNQ9H307 717 aaKnown RBP8.69□□□□□ -1.02
PCNX4-201ENST00000317623 HSP90AA2PQ14568 343 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms