RNA–Protein interactions for RNA: ENST00000475842.5

SLC33A1-205, Transcript of solute carrier family 33 member 1, humanhuman

TSL 3

Gene SLC33A1, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1-205ENST00000475842 AEBP2Q6ZN18 517 aaPredicted RBP33.02■■■□□ 2.88
SLC33A1-205ENST00000475842 CHIC1Q5VXU3 224 aa31.23■■■□□ 2.59
SLC33A1-205ENST00000475842 SENP3Q9H4L4 574 aaPredicted RBP28.15■■■□□ 2.1
SLC33A1-205ENST00000475842 PHF23Q9BUL5 403 aaPredicted RBP27.79■■■□□ 2.04
SLC33A1-205ENST00000475842 FOXD1Q16676 465 aa26.27■■□□□ 1.8
SLC33A1-205ENST00000475842 PLPPR3Q6T4P5 718 aa24.88■■□□□ 1.57
SLC33A1-205ENST00000475842 MSH5O43196 834 aa24.61■■□□□ 1.53
SLC33A1-205ENST00000475842 PPP6R1Q9UPN7 881 aa24.5■■□□□ 1.51
SLC33A1-205ENST00000475842 PIAS4Q8N2W9 510 aaPredicted RBP24.48■■□□□ 1.51
SLC33A1-205ENST00000475842 ADRA2BP18089 450 aa24.4■■□□□ 1.5
SLC33A1-205ENST00000475842 POTEDQ86YR6 584 aa24.23■■□□□ 1.47
SLC33A1-205ENST00000475842 MAPK8IP2Q13387 824 aaPredicted RBP22.45■■□□□ 1.18
SLC33A1-205ENST00000475842 DMRT2Q9Y5R5 561 aa22.32■■□□□ 1.16
SLC33A1-205ENST00000475842 SCAF1Q9H7N4 1312 aaKnown RBP22.3■■□□□ 1.16
SLC33A1-205ENST00000475842 PPP4R3CPQ6ZMV5 832 aa21.8■■□□□ 1.08
SLC33A1-205ENST00000475842 HOXD11P31277 338 aaPredicted RBP21.46■■□□□ 1.03
SLC33A1-205ENST00000475842 CNKSR2Q8WXI2 1034 aa21.42■■□□□ 1.02
SLC33A1-205ENST00000475842 DCAF8L1A6NGE4 600 aa21.36■■□□□ 1.01
SLC33A1-205ENST00000475842 RNF216Q9NWF9 866 aaPredicted RBP21.26■□□□□ 0.99
SLC33A1-205ENST00000475842 CACNB1Q02641 598 aaPredicted RBP21.18■□□□□ 0.98
SLC33A1-205ENST00000475842 RNF39Q9H2S5 420 aa21.01■□□□□ 0.95
SLC33A1-205ENST00000475842 NCBP3Q53F19 620 aaKnown RBP20.92■□□□□ 0.94
SLC33A1-205ENST00000475842 DNAJC5BQ9UF47 199 aa20.76■□□□□ 0.91
SLC33A1-205ENST00000475842 C1QBPQ07021 282 aaKnown RBP20.69■□□□□ 0.9
SLC33A1-205ENST00000475842 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
SLC33A1-205ENST00000475842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.86
SLC33A1-205ENST00000475842 KCNA4P22459 653 aa20.14■□□□□ 0.81
SLC33A1-205ENST00000475842 U3KPZ7 1027 aaPredicted RBP19.99■□□□□ 0.79
SLC33A1-205ENST00000475842 SLC4A2P04920 1241 aa19.76■□□□□ 0.75
SLC33A1-205ENST00000475842 SPINK5Q9NQ38 1064 aaPredicted RBP19.75■□□□□ 0.75
SLC33A1-205ENST00000475842 CAPN15O75808 1086 aa19.69■□□□□ 0.74
SLC33A1-205ENST00000475842 DSG3P32926 999 aa19.63■□□□□ 0.73
SLC33A1-205ENST00000475842 APLP2Q06481 763 aa19.39■□□□□ 0.69
SLC33A1-205ENST00000475842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.36■□□□□ 0.69
SLC33A1-205ENST00000475842 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
SLC33A1-205ENST00000475842 TRHP20396 242 aaPredicted RBP19.35■□□□□ 0.69
SLC33A1-205ENST00000475842 ZNF219Q9P2Y4 722 aaPredicted RBP19.31■□□□□ 0.68
SLC33A1-205ENST00000475842 SAMD1Q6SPF0 538 aaPredicted RBP19.26■□□□□ 0.67
SLC33A1-205ENST00000475842 ABCB7O75027 752 aa19.22■□□□□ 0.67
SLC33A1-205ENST00000475842 MYCNP04198 464 aaPredicted RBP19.07■□□□□ 0.64
SLC33A1-205ENST00000475842 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
SLC33A1-205ENST00000475842 POTEHQ6S545 545 aa18.96■□□□□ 0.63
SLC33A1-205ENST00000475842 POLA2Q14181 598 aa18.82■□□□□ 0.6
SLC33A1-205ENST00000475842 FOXD4L1Q9NU39 408 aa18.81■□□□□ 0.6
SLC33A1-205ENST00000475842 RBM42Q9BTD8 480 aaKnown RBP18.71■□□□□ 0.59
SLC33A1-205ENST00000475842 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
SLC33A1-205ENST00000475842 ZBTB22O15209 634 aa18.53■□□□□ 0.56
SLC33A1-205ENST00000475842 ZBTB12Q9Y330 459 aaPredicted RBP18.41■□□□□ 0.54
SLC33A1-205ENST00000475842 CHRDL2Q6WN34 429 aa18.36■□□□□ 0.53
SLC33A1-205ENST00000475842 ATXN8OSP0DMR3 200 aa18.27■□□□□ 0.52
SLC33A1-205ENST00000475842 AKT1S1Q96B36 256 aa18.27■□□□□ 0.52
SLC33A1-205ENST00000475842 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
SLC33A1-205ENST00000475842 REM2Q8IYK8 340 aaPredicted RBP18.11■□□□□ 0.49
SLC33A1-205ENST00000475842 PITPNM1O00562 1244 aa17.91■□□□□ 0.46
SLC33A1-205ENST00000475842 FBLN2P98095 1184 aa17.91■□□□□ 0.46
SLC33A1-205ENST00000475842 PIP4P2Q8N4L2 257 aa17.91■□□□□ 0.46
SLC33A1-205ENST00000475842 SPDYE2BA6NHP3 402 aa17.85■□□□□ 0.45
SLC33A1-205ENST00000475842 SPDYE6P0CI01 402 aa17.85■□□□□ 0.45
SLC33A1-205ENST00000475842 SPDYE2Q495Y8 402 aa17.85■□□□□ 0.45
SLC33A1-205ENST00000475842 MKRN4PQ13434 485 aaPredicted RBP17.81■□□□□ 0.44
SLC33A1-205ENST00000475842 FXR2P51116 673 aaKnown RBP eCLIP17.79■□□□□ 0.44
SLC33A1-205ENST00000475842 SP7Q8TDD2 431 aaPredicted RBP17.71■□□□□ 0.43
SLC33A1-205ENST00000475842 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
SLC33A1-205ENST00000475842 SSUH2Q9Y2M2 353 aa17.61■□□□□ 0.41
SLC33A1-205ENST00000475842 HAX1O00165 279 aa17.59■□□□□ 0.41
SLC33A1-205ENST00000475842 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
SLC33A1-205ENST00000475842 SPDYE1Q8NFV5 336 aaPredicted RBP17.56■□□□□ 0.4
SLC33A1-205ENST00000475842 CLEC11AQ9Y240 323 aa17.52■□□□□ 0.4
SLC33A1-205ENST00000475842 PRKAR2AP13861 404 aaKnown RBP17.44■□□□□ 0.38
SLC33A1-205ENST00000475842 EVX2Q03828 476 aa17.41■□□□□ 0.38
SLC33A1-205ENST00000475842 PABPN1Q86U42 306 aaKnown RBP eCLIP17.35■□□□□ 0.37
SLC33A1-205ENST00000475842 PRR29P0C7W0 189 aa17.23■□□□□ 0.35
SLC33A1-205ENST00000475842 C19orf67A6NJJ6 358 aa17.22■□□□□ 0.35
SLC33A1-205ENST00000475842 CHADLQ6NUI6 762 aa17.22■□□□□ 0.35
SLC33A1-205ENST00000475842 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
SLC33A1-205ENST00000475842 GABBR2O75899 941 aa17■□□□□ 0.31
SLC33A1-205ENST00000475842 FARP1Q9Y4F1 1045 aaPredicted RBP16.96■□□□□ 0.31
SLC33A1-205ENST00000475842 SPDYE4A6NLX3 237 aa16.88■□□□□ 0.29
SLC33A1-205ENST00000475842 CD44P16070 742 aaKnown RBP16.87■□□□□ 0.29
SLC33A1-205ENST00000475842 STAG3Q9UJ98 1225 aa16.85■□□□□ 0.29
SLC33A1-205ENST00000475842 CREBZFQ9NS37 354 aa16.8■□□□□ 0.28
SLC33A1-205ENST00000475842 CLCN6P51797 869 aa16.68■□□□□ 0.26
SLC33A1-205ENST00000475842 POTEIP0CG38 1075 aa16.65■□□□□ 0.26
SLC33A1-205ENST00000475842 LHX8Q68G74 356 aa16.62■□□□□ 0.25
SLC33A1-205ENST00000475842 ZNF579Q8NAF0 562 aaKnown RBP16.62■□□□□ 0.25
SLC33A1-205ENST00000475842 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
SLC33A1-205ENST00000475842 MNX1P50219 401 aaPredicted RBP16.52■□□□□ 0.24
SLC33A1-205ENST00000475842 PROM2Q8N271 834 aa16.49■□□□□ 0.23
SLC33A1-205ENST00000475842 DCBLD2Q96PD2 775 aa16.48■□□□□ 0.23
SLC33A1-205ENST00000475842 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
SLC33A1-205ENST00000475842 PAK3O75914 559 aaPredicted RBP16.43■□□□□ 0.22
SLC33A1-205ENST00000475842 GALR2O43603 387 aaPredicted RBP16.42■□□□□ 0.22
SLC33A1-205ENST00000475842 PHF12Q96QT6 1004 aa16.38■□□□□ 0.21
SLC33A1-205ENST00000475842 MS4A3Q96HJ5 214 aa16.16■□□□□ 0.18
SLC33A1-205ENST00000475842 TSPYL2Q9H2G4 693 aaPredicted RBP16.16■□□□□ 0.18
SLC33A1-205ENST00000475842 PELP1Q8IZL8 1130 aaKnown RBP16.14■□□□□ 0.17
SLC33A1-205ENST00000475842 MIER1Q8N108 512 aa16.12■□□□□ 0.17
SLC33A1-205ENST00000475842 CCDC61Q9Y6R9 512 aa16.11■□□□□ 0.17
SLC33A1-205ENST00000475842 POTEB2H3BUK9 544 aa16.1■□□□□ 0.17
SLC33A1-205ENST00000475842 PLEKHG5O94827 1062 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms