RNA–Protein interactions for RNA: ENST00000302271.10

HNRNPR-201, Transcript of heterogeneous nuclear ribonucleoprotein R, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HNRNPR, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPR-201ENST00000302271 NISCHQ9Y2I1 1504 aa23.87■■□□□ 1.41
HNRNPR-201ENST00000302271 CCDC180Q9P1Z9 1646 aa20.8■□□□□ 0.92
HNRNPR-201ENST00000302271 ABCC9O60706 1549 aa20.04■□□□□ 0.8
HNRNPR-201ENST00000302271 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
HNRNPR-201ENST00000302271 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
HNRNPR-201ENST00000302271 SHROOM4Q9ULL8 1493 aa19.98■□□□□ 0.79
HNRNPR-201ENST00000302271 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
HNRNPR-201ENST00000302271 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
HNRNPR-201ENST00000302271 MYO15BQ96JP2 1530 aa19.52■□□□□ 0.72
HNRNPR-201ENST00000302271 NACADO15069 1562 aa19.49■□□□□ 0.71
HNRNPR-201ENST00000302271 SLC24A1O60721 1099 aa19.39■□□□□ 0.69
HNRNPR-201ENST00000302271 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
HNRNPR-201ENST00000302271 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
HNRNPR-201ENST00000302271 SCRIBQ14160 1630 aa19.2■□□□□ 0.66
HNRNPR-201ENST00000302271 HRCP23327 699 aa19.08■□□□□ 0.64
HNRNPR-201ENST00000302271 MYT1Q01538 1121 aa19.04■□□□□ 0.64
HNRNPR-201ENST00000302271 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
HNRNPR-201ENST00000302271 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
HNRNPR-201ENST00000302271 PCGF6Q9BYE7 350 aa18.94■□□□□ 0.62
HNRNPR-201ENST00000302271 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
HNRNPR-201ENST00000302271 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
HNRNPR-201ENST00000302271 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
HNRNPR-201ENST00000302271 LOC105371045A0A1W2PR82 267 aa18.72■□□□□ 0.59
HNRNPR-201ENST00000302271 PPARGC1BQ86YN6 1023 aaKnown RBP18.66■□□□□ 0.58
HNRNPR-201ENST00000302271 CECR2Q9BXF3 1484 aa18.62■□□□□ 0.57
HNRNPR-201ENST00000302271 TRIM26Q12899 539 aaPredicted RBP18.51■□□□□ 0.55
HNRNPR-201ENST00000302271 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
HNRNPR-201ENST00000302271 MROH2BQ7Z745 1585 aa18.46■□□□□ 0.55
HNRNPR-201ENST00000302271 BAZ1AQ9NRL2 1556 aaPredicted RBP18.43■□□□□ 0.54
HNRNPR-201ENST00000302271 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
HNRNPR-201ENST00000302271 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
HNRNPR-201ENST00000302271 EIF4G1Q04637 1599 aaKnown RBP18.28■□□□□ 0.52
HNRNPR-201ENST00000302271 WIZO95785 1651 aa18.27■□□□□ 0.52
HNRNPR-201ENST00000302271 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
HNRNPR-201ENST00000302271 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
HNRNPR-201ENST00000302271 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
HNRNPR-201ENST00000302271 DAXXQ9UER7 740 aaPredicted RBP18.17■□□□□ 0.5
HNRNPR-201ENST00000302271 PEG3Q9GZU2 1588 aa18.12■□□□□ 0.49
HNRNPR-201ENST00000302271 APLP2Q06481 763 aa18.11■□□□□ 0.49
HNRNPR-201ENST00000302271 SMARCA2P51531 1590 aa18.11■□□□□ 0.49
HNRNPR-201ENST00000302271 EHMT2Q96KQ7 1210 aa18.08■□□□□ 0.49
HNRNPR-201ENST00000302271 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
HNRNPR-201ENST00000302271 PRKCSHP14314 528 aaPredicted RBP18.05■□□□□ 0.48
HNRNPR-201ENST00000302271 NCAPD3P42695 1498 aa18.05■□□□□ 0.48
HNRNPR-201ENST00000302271 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
HNRNPR-201ENST00000302271 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
HNRNPR-201ENST00000302271 ERICH6Q7L0X2 663 aa18■□□□□ 0.47
HNRNPR-201ENST00000302271 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
HNRNPR-201ENST00000302271 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
HNRNPR-201ENST00000302271 CCDC88BA6NC98 1476 aa17.93■□□□□ 0.46
HNRNPR-201ENST00000302271 SCAF1Q9H7N4 1312 aaKnown RBP17.74■□□□□ 0.43
HNRNPR-201ENST00000302271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
HNRNPR-201ENST00000302271 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
HNRNPR-201ENST00000302271 ABCC8Q09428 1581 aa17.64■□□□□ 0.41
HNRNPR-201ENST00000302271 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
HNRNPR-201ENST00000302271 CFTRP13569 1480 aa17.58■□□□□ 0.41
HNRNPR-201ENST00000302271 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.4
HNRNPR-201ENST00000302271 CEP162Q5TB80 1403 aa17.56■□□□□ 0.4
HNRNPR-201ENST00000302271 NESP48681 1621 aa17.53■□□□□ 0.4
HNRNPR-201ENST00000302271 SOGA1O94964 1423 aa17.52■□□□□ 0.39
HNRNPR-201ENST00000302271 TNIKQ9UKE5 1360 aa17.5■□□□□ 0.39
HNRNPR-201ENST00000302271 ACIN1Q9UKV3 1341 aaKnown RBP17.49■□□□□ 0.39
HNRNPR-201ENST00000302271 DIEXFQ68CQ4 756 aaKnown RBP17.49■□□□□ 0.39
HNRNPR-201ENST00000302271 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.39
HNRNPR-201ENST00000302271 EEA1Q15075 1411 aa17.45■□□□□ 0.38
HNRNPR-201ENST00000302271 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
HNRNPR-201ENST00000302271 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
HNRNPR-201ENST00000302271 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
HNRNPR-201ENST00000302271 LAMC3Q9Y6N6 1575 aa17.41■□□□□ 0.38
HNRNPR-201ENST00000302271 CENPBP07199 599 aaPredicted RBP17.38■□□□□ 0.37
HNRNPR-201ENST00000302271 FANCD2Q9BXW9 1451 aa17.38■□□□□ 0.37
HNRNPR-201ENST00000302271 GOLGA3Q08378 1498 aa17.36■□□□□ 0.37
HNRNPR-201ENST00000302271 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
HNRNPR-201ENST00000302271 PRDM2Q13029 1718 aa17.33■□□□□ 0.36
HNRNPR-201ENST00000302271 GTF3C3Q9Y5Q9 886 aa17.32■□□□□ 0.36
HNRNPR-201ENST00000302271 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
HNRNPR-201ENST00000302271 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
HNRNPR-201ENST00000302271 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
HNRNPR-201ENST00000302271 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.36
HNRNPR-201ENST00000302271 CUX1P39880 1505 aa17.25■□□□□ 0.35
HNRNPR-201ENST00000302271 KIF21AQ7Z4S6 1674 aa17.21■□□□□ 0.35
HNRNPR-201ENST00000302271 TOP2BQ02880 1626 aa17.21■□□□□ 0.35
HNRNPR-201ENST00000302271 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
HNRNPR-201ENST00000302271 KIF21BO75037 1637 aa17.2■□□□□ 0.34
HNRNPR-201ENST00000302271 ERCC6Q03468 1493 aa17.2■□□□□ 0.34
HNRNPR-201ENST00000302271 CLIP1P30622 1438 aa17.18■□□□□ 0.34
HNRNPR-201ENST00000302271 URB2Q14146 1524 aaKnown RBP17.17■□□□□ 0.34
HNRNPR-201ENST00000302271 BIVM-ERCC5R4GMW8 1640 aa17.16■□□□□ 0.34
HNRNPR-201ENST00000302271 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
HNRNPR-201ENST00000302271 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
HNRNPR-201ENST00000302271 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
HNRNPR-201ENST00000302271 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
HNRNPR-201ENST00000302271 FGD5Q6ZNL6 1462 aa17.11■□□□□ 0.33
HNRNPR-201ENST00000302271 MRC2Q9UBG0 1479 aa17.11■□□□□ 0.33
HNRNPR-201ENST00000302271 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.32
HNRNPR-201ENST00000302271 MIER1Q8N108 512 aa17.07■□□□□ 0.32
HNRNPR-201ENST00000302271 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
HNRNPR-201ENST00000302271 RANGAP1P46060 587 aaPredicted RBP17.06■□□□□ 0.32
HNRNPR-201ENST00000302271 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
HNRNPR-201ENST00000302271 WDR62O43379 1518 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms