RNA–Protein interactions for RNA: ENST00000406854.5

PCNX4-203, Transcript of pecanex 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCNX4, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-203ENST00000406854 DCAF8L2P0C7V8 631 aa25■■□□□ 1.59
PCNX4-203ENST00000406854 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
PCNX4-203ENST00000406854 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
PCNX4-203ENST00000406854 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
PCNX4-203ENST00000406854 EHMT2Q96KQ7 1210 aa23.24■■□□□ 1.31
PCNX4-203ENST00000406854 PCGF6Q9BYE7 350 aa22.96■■□□□ 1.27
PCNX4-203ENST00000406854 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
PCNX4-203ENST00000406854 PELP1Q8IZL8 1130 aaKnown RBP22.76■■□□□ 1.23
PCNX4-203ENST00000406854 APLP2Q06481 763 aa22.7■■□□□ 1.22
PCNX4-203ENST00000406854 TTBK1Q5TCY1 1321 aaPredicted RBP22.51■■□□□ 1.19
PCNX4-203ENST00000406854 ZEB1P37275 1124 aaPredicted RBP22.48■■□□□ 1.19
PCNX4-203ENST00000406854 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
PCNX4-203ENST00000406854 CENPBP07199 599 aaPredicted RBP22.34■■□□□ 1.17
PCNX4-203ENST00000406854 CCER1Q8TC90 406 aaPredicted RBP22.31■■□□□ 1.16
PCNX4-203ENST00000406854 RANGAP1P46060 587 aaPredicted RBP22.12■■□□□ 1.13
PCNX4-203ENST00000406854 UBTFP17480 764 aaKnown RBP22.04■■□□□ 1.12
PCNX4-203ENST00000406854 HRCP23327 699 aa22.03■■□□□ 1.12
PCNX4-203ENST00000406854 TRIM26Q12899 539 aaPredicted RBP22■■□□□ 1.11
PCNX4-203ENST00000406854 PPARGC1BQ86YN6 1023 aaKnown RBP21.91■■□□□ 1.1
PCNX4-203ENST00000406854 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.1
PCNX4-203ENST00000406854 YTHDC1Q96MU7 727 aaKnown RBP21.83■■□□□ 1.09
PCNX4-203ENST00000406854 LOC105371045A0A1W2PR82 267 aa21.82■■□□□ 1.08
PCNX4-203ENST00000406854 ATP1B4Q9UN42 357 aaPredicted RBP21.8■■□□□ 1.08
PCNX4-203ENST00000406854 ERICH6Q7L0X2 663 aa21.77■■□□□ 1.08
PCNX4-203ENST00000406854 NEFLP07196 543 aa21.65■■□□□ 1.06
PCNX4-203ENST00000406854 MYT1Q01538 1121 aa21.61■■□□□ 1.05
PCNX4-203ENST00000406854 HNRNPUL2Q1KMD3 747 aaKnown RBP21.38■■□□□ 1.01
PCNX4-203ENST00000406854 ITGAEP38570 1179 aa21.34■■□□□ 1.01
PCNX4-203ENST00000406854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.31■■□□□ 1
PCNX4-203ENST00000406854 DIEXFQ68CQ4 756 aaKnown RBP21.23■□□□□ 0.99
PCNX4-203ENST00000406854 POLR3GLQ9BT43 218 aa20.99■□□□□ 0.95
PCNX4-203ENST00000406854 GTF3C3Q9Y5Q9 886 aa20.89■□□□□ 0.94
PCNX4-203ENST00000406854 CNGB1Q14028 1251 aaPredicted RBP20.87■□□□□ 0.93
PCNX4-203ENST00000406854 DAXXQ9UER7 740 aaPredicted RBP20.83■□□□□ 0.92
PCNX4-203ENST00000406854 FAM50AQ14320 339 aaKnown RBP20.77■□□□□ 0.92
PCNX4-203ENST00000406854 ZNF316A6NFI3 1004 aaPredicted RBP20.74■□□□□ 0.91
PCNX4-203ENST00000406854 NEUROD1Q13562 356 aa20.69■□□□□ 0.9
PCNX4-203ENST00000406854 ABCC9O60706 1549 aa20.67■□□□□ 0.9
PCNX4-203ENST00000406854 PABPN1Q86U42 306 aaKnown RBP eCLIP20.67■□□□□ 0.9
PCNX4-203ENST00000406854 ACIN1Q9UKV3 1341 aaKnown RBP20.67■□□□□ 0.9
PCNX4-203ENST00000406854 MYT1LQ9UL68 1186 aa20.67■□□□□ 0.9
PCNX4-203ENST00000406854 BCANQ96GW7 911 aa20.62■□□□□ 0.89
PCNX4-203ENST00000406854 CSRNP3Q8WYN3 585 aa20.6■□□□□ 0.89
PCNX4-203ENST00000406854 TRIM52Q96A61 297 aa20.59■□□□□ 0.89
PCNX4-203ENST00000406854 ANP32CO43423 234 aa20.56■□□□□ 0.88
PCNX4-203ENST00000406854 RTL5Q5HYW3 569 aaPredicted RBP20.55■□□□□ 0.88
PCNX4-203ENST00000406854 DCAF1Q9Y4B6 1507 aa20.51■□□□□ 0.87
PCNX4-203ENST00000406854 CLSPNQ9HAW4 1339 aa20.43■□□□□ 0.86
PCNX4-203ENST00000406854 CDK11AQ9UQ88 783 aaPredicted RBP20.41■□□□□ 0.86
PCNX4-203ENST00000406854 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
PCNX4-203ENST00000406854 ZCCHC6Q5VYS8 1495 aaKnown RBP20.37■□□□□ 0.85
PCNX4-203ENST00000406854 ZNF326Q5BKZ1 582 aaKnown RBP20.35■□□□□ 0.85
PCNX4-203ENST00000406854 P3H3Q8IVL6 736 aa20.29■□□□□ 0.84
PCNX4-203ENST00000406854 FKBP8Q14318 412 aa20.14■□□□□ 0.81
PCNX4-203ENST00000406854 SCAF1Q9H7N4 1312 aaKnown RBP20.13■□□□□ 0.81
PCNX4-203ENST00000406854 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
PCNX4-203ENST00000406854 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
PCNX4-203ENST00000406854 DDX10Q13206 875 aaKnown RBP20.11■□□□□ 0.81
PCNX4-203ENST00000406854 ARID3CA6NKF2 412 aa20.09■□□□□ 0.81
PCNX4-203ENST00000406854 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
PCNX4-203ENST00000406854 FBLN2P98095 1184 aa20.06■□□□□ 0.8
PCNX4-203ENST00000406854 ANP32AP39687 249 aaKnown RBP20.03■□□□□ 0.8
PCNX4-203ENST00000406854 HNRNPUQ00839 825 aaKnown RBP eCLIP20.03■□□□□ 0.8
PCNX4-203ENST00000406854 MIER1Q8N108 512 aa20.03■□□□□ 0.8
PCNX4-203ENST00000406854 ZNF777Q9ULD5 760 aaPredicted RBP19.96■□□□□ 0.79
PCNX4-203ENST00000406854 CANXP27824 592 aaKnown RBP19.94■□□□□ 0.78
PCNX4-203ENST00000406854 FAM9BQ8IZU0 186 aa19.91■□□□□ 0.78
PCNX4-203ENST00000406854 NPM2Q86SE8 214 aaKnown RBP19.9■□□□□ 0.78
PCNX4-203ENST00000406854 ZBTB47Q9UFB7 747 aaPredicted RBP19.88■□□□□ 0.77
PCNX4-203ENST00000406854 CLIP1P30622 1438 aa19.87■□□□□ 0.77
PCNX4-203ENST00000406854 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
PCNX4-203ENST00000406854 CHIC2Q9UKJ5 165 aa19.81■□□□□ 0.76
PCNX4-203ENST00000406854 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
PCNX4-203ENST00000406854 CEP162Q5TB80 1403 aa19.79■□□□□ 0.76
PCNX4-203ENST00000406854 HIRIP3Q9BW71 556 aaPredicted RBP19.78■□□□□ 0.76
PCNX4-203ENST00000406854 BCL11AQ9H165 835 aa19.77■□□□□ 0.75
PCNX4-203ENST00000406854 NEFMP07197 916 aa19.76■□□□□ 0.75
PCNX4-203ENST00000406854 CCDC136Q96JN2 1154 aa19.75■□□□□ 0.75
PCNX4-203ENST00000406854 MRS2Q9HD23 443 aa19.75■□□□□ 0.75
PCNX4-203ENST00000406854 EEA1Q15075 1411 aa19.75■□□□□ 0.75
PCNX4-203ENST00000406854 TMC1Q8TDI8 760 aa19.75■□□□□ 0.75
PCNX4-203ENST00000406854 SALL2Q9Y467 1007 aaPredicted RBP19.74■□□□□ 0.75
PCNX4-203ENST00000406854 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
PCNX4-203ENST00000406854 GOLGA3Q08378 1498 aa19.69■□□□□ 0.74
PCNX4-203ENST00000406854 IRX6P78412 446 aaPredicted RBP19.68■□□□□ 0.74
PCNX4-203ENST00000406854 TNIKQ9UKE5 1360 aa19.64■□□□□ 0.74
PCNX4-203ENST00000406854 EIF4G2P78344 907 aaKnown RBP eCLIP19.64■□□□□ 0.73
PCNX4-203ENST00000406854 NBR1Q14596 966 aa19.61■□□□□ 0.73
PCNX4-203ENST00000406854 SLC24A1O60721 1099 aa19.6■□□□□ 0.73
PCNX4-203ENST00000406854 UPF2Q9HAU5 1272 aaKnown RBP19.58■□□□□ 0.72
PCNX4-203ENST00000406854 WRNQ14191 1432 aaPredicted RBP eCLIP19.58■□□□□ 0.72
PCNX4-203ENST00000406854 KDM2AQ9Y2K7 1162 aa19.57■□□□□ 0.72
PCNX4-203ENST00000406854 TSPY4P0CV99 314 aa19.57■□□□□ 0.72
PCNX4-203ENST00000406854 TSPY10P0CW01 314 aa19.57■□□□□ 0.72
PCNX4-203ENST00000406854 RRP7BPQ9NSQ0 103 aa19.56■□□□□ 0.72
PCNX4-203ENST00000406854 EIF5BO60841 1220 aaKnown RBP19.55■□□□□ 0.72
PCNX4-203ENST00000406854 CHGAP10645 457 aaKnown RBP19.55■□□□□ 0.72
PCNX4-203ENST00000406854 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.54■□□□□ 0.72
PCNX4-203ENST00000406854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.53■□□□□ 0.72
PCNX4-203ENST00000406854 HSP90AA1P07900 732 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms