RNA–Protein interactions for RNA: ENST00000378017.7

MTSS1-202, Transcript of MTSS1, I-BAR domain containing, humanhuman

TSL 1 (best) BASIC

Gene MTSS1, Length 4,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1-202ENST00000378017 NISCHQ9Y2I1 1504 aa19.26■□□□□ 0.67
MTSS1-202ENST00000378017 DCAF8L2P0C7V8 631 aa17.57■□□□□ 0.4
MTSS1-202ENST00000378017 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
MTSS1-202ENST00000378017 SHROOM4Q9ULL8 1493 aa17.41■□□□□ 0.38
MTSS1-202ENST00000378017 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
MTSS1-202ENST00000378017 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
MTSS1-202ENST00000378017 HRCP23327 699 aa16.31■□□□□ 0.2
MTSS1-202ENST00000378017 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
MTSS1-202ENST00000378017 FAM9AQ8IZU1 332 aaPredicted RBP16.25■□□□□ 0.19
MTSS1-202ENST00000378017 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
MTSS1-202ENST00000378017 ZEB1P37275 1124 aaPredicted RBP16.21■□□□□ 0.18
MTSS1-202ENST00000378017 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
MTSS1-202ENST00000378017 TRIM26Q12899 539 aaPredicted RBP16.11■□□□□ 0.17
MTSS1-202ENST00000378017 LOC105371045A0A1W2PR82 267 aa16.07■□□□□ 0.16
MTSS1-202ENST00000378017 CCDC180Q9P1Z9 1646 aa16.03■□□□□ 0.16
MTSS1-202ENST00000378017 CCER1Q8TC90 406 aaPredicted RBP15.86■□□□□ 0.13
MTSS1-202ENST00000378017 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
MTSS1-202ENST00000378017 APLP2Q06481 763 aa15.86■□□□□ 0.13
MTSS1-202ENST00000378017 TTBK1Q5TCY1 1321 aaPredicted RBP15.81■□□□□ 0.12
MTSS1-202ENST00000378017 CENPBP07199 599 aaPredicted RBP15.74■□□□□ 0.11
MTSS1-202ENST00000378017 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
MTSS1-202ENST00000378017 PELP1Q8IZL8 1130 aaKnown RBP15.73■□□□□ 0.11
MTSS1-202ENST00000378017 UBTFP17480 764 aaKnown RBP15.71■□□□□ 0.11
MTSS1-202ENST00000378017 MYO15BQ96JP2 1530 aa15.7■□□□□ 0.1
MTSS1-202ENST00000378017 ABCC9O60706 1549 aa15.55■□□□□ 0.08
MTSS1-202ENST00000378017 SCRIBQ14160 1630 aa15.52■□□□□ 0.07
MTSS1-202ENST00000378017 RANGAP1P46060 587 aaPredicted RBP15.5■□□□□ 0.07
MTSS1-202ENST00000378017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.46■□□□□ 0.06
MTSS1-202ENST00000378017 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.06
MTSS1-202ENST00000378017 YTHDC1Q96MU7 727 aaKnown RBP15.35■□□□□ 0.05
MTSS1-202ENST00000378017 DIEXFQ68CQ4 756 aaKnown RBP15.34■□□□□ 0.05
MTSS1-202ENST00000378017 HNRNPUL2Q1KMD3 747 aaKnown RBP15.29■□□□□ 0.04
MTSS1-202ENST00000378017 MYT1Q01538 1121 aa15.22■□□□□ 0.03
MTSS1-202ENST00000378017 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
MTSS1-202ENST00000378017 RB1CC1Q8TDY2 1594 aa15.2■□□□□ 0.02
MTSS1-202ENST00000378017 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.024e-8■□□□□ 9.7
MTSS1-202ENST00000378017 NACADO15069 1562 aa15.16■□□□□ 0.02
MTSS1-202ENST00000378017 ATP1B4Q9UN42 357 aaPredicted RBP15.15■□□□□ 0.02
MTSS1-202ENST00000378017 ZNF316A6NFI3 1004 aaPredicted RBP15.11■□□□□ 0.01
MTSS1-202ENST00000378017 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
MTSS1-202ENST00000378017 GTF3C3Q9Y5Q9 886 aa15.08■□□□□ 0
MTSS1-202ENST00000378017 ITGAEP38570 1179 aa15.05■□□□□ 0
MTSS1-202ENST00000378017 CECR2Q9BXF3 1484 aa15.02■□□□□ -0
MTSS1-202ENST00000378017 NEFLP07196 543 aa15.01□□□□□ -0.01
MTSS1-202ENST00000378017 EEA1Q15075 1411 aa14.99□□□□□ -0.01
MTSS1-202ENST00000378017 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
MTSS1-202ENST00000378017 CEP162Q5TB80 1403 aa14.96□□□□□ -0.02
MTSS1-202ENST00000378017 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
MTSS1-202ENST00000378017 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
MTSS1-202ENST00000378017 TNIKQ9UKE5 1360 aa14.91□□□□□ -0.02
MTSS1-202ENST00000378017 GOLGA3Q08378 1498 aa14.89□□□□□ -0.03
MTSS1-202ENST00000378017 NEUROD1Q13562 356 aa14.89□□□□□ -0.03
MTSS1-202ENST00000378017 CLIP1P30622 1438 aa14.84□□□□□ -0.03
MTSS1-202ENST00000378017 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
MTSS1-202ENST00000378017 FAM50AQ14320 339 aaKnown RBP14.81□□□□□ -0.04
MTSS1-202ENST00000378017 ERICH6Q7L0X2 663 aa14.81□□□□□ -0.04
MTSS1-202ENST00000378017 WIZO95785 1651 aa14.77□□□□□ -0.04
MTSS1-202ENST00000378017 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.05
MTSS1-202ENST00000378017 SOGA1O94964 1423 aa14.75□□□□□ -0.05
MTSS1-202ENST00000378017 CCDC88BA6NC98 1476 aa14.74□□□□□ -0.05
MTSS1-202ENST00000378017 CLSPNQ9HAW4 1339 aa14.72□□□□□ -0.05
MTSS1-202ENST00000378017 ABCC8Q09428 1581 aa14.71□□□□□ -0.05
MTSS1-202ENST00000378017 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.06
MTSS1-202ENST00000378017 MIER1Q8N108 512 aa14.69□□□□□ -0.06
MTSS1-202ENST00000378017 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
MTSS1-202ENST00000378017 ANP32CO43423 234 aa14.63□□□□□ -0.07
MTSS1-202ENST00000378017 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
MTSS1-202ENST00000378017 VPS8Q8N3P4 1428 aa14.57□□□□□ -0.08
MTSS1-202ENST00000378017 SMARCA4P51532 1647 aa14.56□□□□□ -0.08
MTSS1-202ENST00000378017 BCANQ96GW7 911 aa14.55□□□□□ -0.08
MTSS1-202ENST00000378017 TRIM52Q96A61 297 aa14.54□□□□□ -0.08
MTSS1-202ENST00000378017 KIF27Q86VH2 1401 aa14.54□□□□□ -0.08
MTSS1-202ENST00000378017 POLR3GLQ9BT43 218 aa14.49□□□□□ -0.09
MTSS1-202ENST00000378017 DDX10Q13206 875 aaKnown RBP14.47□□□□□ -0.09
MTSS1-202ENST00000378017 TONSLQ96HA7 1378 aa14.47□□□□□ -0.09
MTSS1-202ENST00000378017 SMARCA2P51531 1590 aa14.47□□□□□ -0.09
MTSS1-202ENST00000378017 RUSC2Q8N2Y8 1516 aa14.44□□□□□ -0.1
MTSS1-202ENST00000378017 CCNB3Q8WWL7 1395 aa14.41□□□□□ -0.1
MTSS1-202ENST00000378017 FKBP8Q14318 412 aa14.41□□□□□ -0.1
MTSS1-202ENST00000378017 CDK11AQ9UQ88 783 aaPredicted RBP14.38□□□□□ -0.11
MTSS1-202ENST00000378017 CNGB1Q14028 1251 aaPredicted RBP14.38□□□□□ -0.11
MTSS1-202ENST00000378017 RAPGEF2Q9Y4G8 1499 aa14.36□□□□□ -0.11
MTSS1-202ENST00000378017 MTUS2Q5JR59 1369 aa14.35□□□□□ -0.11
MTSS1-202ENST00000378017 ATAD2BQ9ULI0 1458 aa14.35□□□□□ -0.11
MTSS1-202ENST00000378017 KANK4Q5T7N3 995 aaPredicted RBP14.34□□□□□ -0.11
MTSS1-202ENST00000378017 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
MTSS1-202ENST00000378017 HNRNPUQ00839 825 aaKnown RBP eCLIP14.29□□□□□ -0.12
MTSS1-202ENST00000378017 CUX2O14529 1486 aa14.29□□□□□ -0.12
MTSS1-202ENST00000378017 CARMIL1Q5VZK9 1371 aa14.29□□□□□ -0.12
MTSS1-202ENST00000378017 TIMELESSQ9UNS1 1208 aa14.27□□□□□ -0.12
MTSS1-202ENST00000378017 ZNF326Q5BKZ1 582 aaKnown RBP14.26□□□□□ -0.13
MTSS1-202ENST00000378017 SUPT16HQ9Y5B9 1047 aaKnown RBP14.26□□□□□ -0.13
MTSS1-202ENST00000378017 ARID3CA6NKF2 412 aa14.26□□□□□ -0.13
MTSS1-202ENST00000378017 HIRIP3Q9BW71 556 aaPredicted RBP14.26□□□□□ -0.13
MTSS1-202ENST00000378017 SETD5Q9C0A6 1442 aa14.25□□□□□ -0.13
MTSS1-202ENST00000378017 SIN3AQ96ST3 1273 aa14.24□□□□□ -0.13
MTSS1-202ENST00000378017 KIF21BO75037 1637 aa14.24□□□□□ -0.13
MTSS1-202ENST00000378017 DHX57Q6P158 1386 aaKnown RBP14.24□□□□□ -0.13
MTSS1-202ENST00000378017 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
MTSS1-202ENST00000378017 RAB3GAP2Q9H2M9 1393 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms