RNA–Protein interactions for RNA: ENST00000483099.5

SNRPE-206, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 2

Gene SNRPE, Length 967 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-206ENST00000483099 NISCHQ9Y2I1 1504 aa49.58■■■■■ 5.53
SNRPE-206ENST00000483099 ABCC9O60706 1549 aa44.9■■■■■ 4.78
SNRPE-206ENST00000483099 CCDC180Q9P1Z9 1646 aa44.62■■■■■ 4.73
SNRPE-206ENST00000483099 RB1CC1Q8TDY2 1594 aa42.6■■■■■ 4.41
SNRPE-206ENST00000483099 DNAJC5BQ9UF47 199 aa42.26■■■■■ 4.36
SNRPE-206ENST00000483099 NACADO15069 1562 aa42.22■■■■■ 4.35
SNRPE-206ENST00000483099 DCAF8L2P0C7V8 631 aa42.01■■■■■ 4.32
SNRPE-206ENST00000483099 PABPN1Q86U42 306 aaKnown RBP eCLIP41.74■■■■■ 4.27
SNRPE-206ENST00000483099 UNC13AQ9UPW8 1703 aa41.66■■■■■ 4.26
SNRPE-206ENST00000483099 MYO15BQ96JP2 1530 aa41.51■■■■■ 4.24
SNRPE-206ENST00000483099 BICRAQ9NZM4 1560 aa41.35■■■■■ 4.21
SNRPE-206ENST00000483099 ZCCHC6Q5VYS8 1495 aaKnown RBP41.04■■■■■ 4.16
SNRPE-206ENST00000483099 DCAF1Q9Y4B6 1507 aa40.9■■■■■ 4.14
SNRPE-206ENST00000483099 SHROOM4Q9ULL8 1493 aa40.75■■■■■ 4.11
SNRPE-206ENST00000483099 SCRIBQ14160 1630 aa40.69■■■■■ 4.1
SNRPE-206ENST00000483099 CC2D2AQ9P2K1 1620 aa40.53■■■■■ 4.08
SNRPE-206ENST00000483099 CECR2Q9BXF3 1484 aa40.45■■■■■ 4.07
SNRPE-206ENST00000483099 EIF4G1Q04637 1599 aaKnown RBP40.37■■■■■ 4.05
SNRPE-206ENST00000483099 DNAJC5Q9H3Z4 198 aa38.98■■■■□ 3.83
SNRPE-206ENST00000483099 NCAPD3P42695 1498 aa38.96■■■■□ 3.83
SNRPE-206ENST00000483099 ATAD2BQ9ULI0 1458 aa38.83■■■■□ 3.81
SNRPE-206ENST00000483099 ERCC6Q03468 1493 aa38.79■■■■□ 3.8
SNRPE-206ENST00000483099 CUX2O14529 1486 aa38.76■■■■□ 3.8
SNRPE-206ENST00000483099 SMARCA4P51532 1647 aa38.76■■■■□ 3.8
SNRPE-206ENST00000483099 SMARCA2P51531 1590 aa38.73■■■■□ 3.79
SNRPE-206ENST00000483099 HMGXB3Q12766 1538 aa38.68■■■■□ 3.78
SNRPE-206ENST00000483099 BAZ1AQ9NRL2 1556 aaPredicted RBP38.52■■■■□ 3.76
SNRPE-206ENST00000483099 NESP48681 1621 aa38.49■■■■□ 3.75
SNRPE-206ENST00000483099 BAZ1BQ9UIG0 1483 aaKnown RBP38.47■■■■□ 3.75
SNRPE-206ENST00000483099 PEG3Q9GZU2 1588 aa38.34■■■■□ 3.73
SNRPE-206ENST00000483099 MROH2BQ7Z745 1585 aa38.22■■■■□ 3.71
SNRPE-206ENST00000483099 THOC2Q8NI27 1593 aaKnown RBP38.15■■■■□ 3.7
SNRPE-206ENST00000483099 LAMC3Q9Y6N6 1575 aa38.15■■■■□ 3.7
SNRPE-206ENST00000483099 KIF21AQ7Z4S6 1674 aa38.01■■■■□ 3.67
SNRPE-206ENST00000483099 PDS5BQ9NTI5 1447 aa37.94■■■■□ 3.66
SNRPE-206ENST00000483099 WIZO95785 1651 aa37.77■■■■□ 3.64
SNRPE-206ENST00000483099 CADPSQ9ULU8 1353 aa37.77■■■■□ 3.64
SNRPE-206ENST00000483099 MRC2Q9UBG0 1479 aa37.64■■■■□ 3.62
SNRPE-206ENST00000483099 WDR62O43379 1518 aa37.56■■■■□ 3.6
SNRPE-206ENST00000483099 CEP164Q9UPV0 1460 aa37.45■■■■□ 3.59
SNRPE-206ENST00000483099 FANCD2Q9BXW9 1451 aa37.39■■■■□ 3.58
SNRPE-206ENST00000483099 RSF1Q96T23 1441 aaPredicted RBP37.31■■■■□ 3.56
SNRPE-206ENST00000483099 CFTRP13569 1480 aa37.3■■■■□ 3.56
SNRPE-206ENST00000483099 TOP2AP11388 1531 aaKnown RBP37.26■■■■□ 3.56
SNRPE-206ENST00000483099 TRIM41Q8WV44 630 aa37.26■■■■□ 3.56
SNRPE-206ENST00000483099 URB2Q14146 1524 aaKnown RBP37.09■■■■□ 3.53
SNRPE-206ENST00000483099 PRDM2Q13029 1718 aa36.96■■■■□ 3.51
SNRPE-206ENST00000483099 OSCARQ8IYS5 282 aa36.93■■■■□ 3.5
SNRPE-206ENST00000483099 CCDC88BA6NC98 1476 aa36.82■■■■□ 3.49
SNRPE-206ENST00000483099 IFT140Q96RY7 1462 aa36.7■■■■□ 3.47
SNRPE-206ENST00000483099 ZNF608Q9ULD9 1512 aaPredicted RBP36.68■■■■□ 3.46
SNRPE-206ENST00000483099 TOPBP1Q92547 1522 aa36.64■■■■□ 3.46
SNRPE-206ENST00000483099 RIMBP3CA6NJZ7 1639 aa36.53■■■■□ 3.44
SNRPE-206ENST00000483099 RIMBP3BA6NNM3 1639 aa36.53■■■■□ 3.44
SNRPE-206ENST00000483099 RIMBP3Q9UFD9 1639 aa36.53■■■■□ 3.44
SNRPE-206ENST00000483099 ABCC8Q09428 1581 aa36.52■■■■□ 3.44
SNRPE-206ENST00000483099 EIF4G3O43432 1585 aaKnown RBP36.49■■■■□ 3.43
SNRPE-206ENST00000483099 DNMBPQ6XZF7 1577 aa36.49■■■■□ 3.43
SNRPE-206ENST00000483099 ARHGEF11O15085 1522 aa36.39■■■■□ 3.42
SNRPE-206ENST00000483099 TARBP1Q13395 1621 aaKnown RBP36.34■■■■□ 3.41
SNRPE-206ENST00000483099 AQRO60306 1485 aaKnown RBP eCLIP36.31■■■■□ 3.41e-7■■■■■ 28.5
SNRPE-206ENST00000483099 CHD1O14646 1710 aa36.28■■■■□ 3.4
SNRPE-206ENST00000483099 POLA1P09884 1462 aaPredicted RBP36.26■■■■□ 3.4
SNRPE-206ENST00000483099 FBLN2P98095 1184 aa36.15■■■■□ 3.38
SNRPE-206ENST00000483099 RAD54L2Q9Y4B4 1467 aa36.13■■■■□ 3.37
SNRPE-206ENST00000483099 CYB5RLQ6IPT4 315 aa36.12■■■■□ 3.37
SNRPE-206ENST00000483099 SOGA1O94964 1423 aa36.08■■■■□ 3.37
SNRPE-206ENST00000483099 TDRD9Q8NDG6 1382 aaKnown RBP36.04■■■■□ 3.36
SNRPE-206ENST00000483099 FGD5Q6ZNL6 1462 aa36■■■■□ 3.35
SNRPE-206ENST00000483099 ARAP1Q96P48 1450 aa36■■■■□ 3.35
SNRPE-206ENST00000483099 SNAPC4Q5SXM2 1469 aa35.95■■■■□ 3.35
SNRPE-206ENST00000483099 WDR97A6NE52 1622 aa35.94■■■■□ 3.34
SNRPE-206ENST00000483099 CUX1P39880 1505 aa35.92■■■■□ 3.34
SNRPE-206ENST00000483099 MAGI1Q96QZ7 1491 aaPredicted RBP35.82■■■■□ 3.32
SNRPE-206ENST00000483099 TRHP20396 242 aaPredicted RBP35.82■■■■□ 3.32
SNRPE-206ENST00000483099 CHMP7Q8WUX9 453 aaPredicted RBP35.81■■■■□ 3.32
SNRPE-206ENST00000483099 CLASP1Q7Z460 1538 aa35.81■■■■□ 3.32
SNRPE-206ENST00000483099 GRIN2BQ13224 1484 aa35.8■■■■□ 3.32
SNRPE-206ENST00000483099 SYNJ1O43426 1573 aa35.79■■■■□ 3.32
SNRPE-206ENST00000483099 SYNJ2O15056 1496 aa35.71■■■■□ 3.31
SNRPE-206ENST00000483099 PBRM1Q86U86 1689 aa35.69■■■■□ 3.3
SNRPE-206ENST00000483099 GAPVD1Q14C86 1478 aa35.64■■■■□ 3.3
SNRPE-206ENST00000483099 ABCA10Q8WWZ4 1543 aa35.56■■■■□ 3.28
SNRPE-206ENST00000483099 ABCA5Q8WWZ7 1642 aa35.55■■■■□ 3.28
SNRPE-206ENST00000483099 SUPT5HO00267 1087 aaKnown RBP35.53■■■■□ 3.28
SNRPE-206ENST00000483099 WRNQ14191 1432 aaPredicted RBP eCLIP35.37■■■■□ 3.25
SNRPE-206ENST00000483099 GRIN2AQ12879 1464 aa35.35■■■■□ 3.25
SNRPE-206ENST00000483099 ADAMTS12P58397 1594 aa35.31■■■■□ 3.24
SNRPE-206ENST00000483099 BIVM-ERCC5R4GMW8 1640 aa35.29■■■■□ 3.24
SNRPE-206ENST00000483099 TOP2BQ02880 1626 aa35.28■■■■□ 3.24
SNRPE-206ENST00000483099 ERCC6L2Q5T890 1561 aa35.25■■■■□ 3.23
SNRPE-206ENST00000483099 CEP170Q5SW79 1584 aa35.25■■■■□ 3.23
SNRPE-206ENST00000483099 NUP160Q12769 1436 aa35.22■■■■□ 3.23
SNRPE-206ENST00000483099 FHAD1B1AJZ9 1412 aa35.17■■■■□ 3.22
SNRPE-206ENST00000483099 ERICH3Q5RHP9 1530 aa35.11■■■■□ 3.21
SNRPE-206ENST00000483099 SHROOM2Q13796 1616 aa35.1■■■■□ 3.21
SNRPE-206ENST00000483099 AEBP2Q6ZN18 517 aaPredicted RBP34.97■■■■□ 3.19
SNRPE-206ENST00000483099 PRG4Q92954 1404 aaPredicted RBP34.91■■■■□ 3.18
SNRPE-206ENST00000483099 JPH4Q96JJ6 628 aa34.84■■■■□ 3.17
SNRPE-206ENST00000483099 RUSC2Q8N2Y8 1516 aa34.83■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms