RNA–Protein interactions for RNA: ENST00000324545.8

USP9X-201, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 5 BASIC

Gene USP9X, Length 12,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-201ENST00000324545 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
USP9X-201ENST00000324545 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
USP9X-201ENST00000324545 TTBK1Q5TCY1 1321 aaPredicted RBP12.34□□□□□ -0.43
USP9X-201ENST00000324545 MYT1Q01538 1121 aa12.28□□□□□ -0.44
USP9X-201ENST00000324545 SUPT5HO00267 1087 aaKnown RBP12.12□□□□□ -0.47
USP9X-201ENST00000324545 PELP1Q8IZL8 1130 aaKnown RBP12.05□□□□□ -0.48
USP9X-201ENST00000324545 ERICH6Q7L0X2 663 aa12.03□□□□□ -0.48
USP9X-201ENST00000324545 RANGAP1P46060 587 aaPredicted RBP12.01□□□□□ -0.49
USP9X-201ENST00000324545 SHROOM4Q9ULL8 1493 aa11.94□□□□□ -0.5
USP9X-201ENST00000324545 YTHDC1Q96MU7 727 aaKnown RBP11.8□□□□□ -0.52
USP9X-201ENST00000324545 FAM9AQ8IZU1 332 aaPredicted RBP11.75□□□□□ -0.53
USP9X-201ENST00000324545 PCGF6Q9BYE7 350 aa11.73□□□□□ -0.53
USP9X-201ENST00000324545 ATP1B4Q9UN42 357 aaPredicted RBP11.72□□□□□ -0.53
USP9X-201ENST00000324545 CNGB1Q14028 1251 aaPredicted RBP11.7□□□□□ -0.54
USP9X-201ENST00000324545 CHIC1Q5VXU3 224 aa11.67□□□□□ -0.54
USP9X-201ENST00000324545 APLP2Q06481 763 aa11.63□□□□□ -0.55
USP9X-201ENST00000324545 POLR3GLQ9BT43 218 aa11.55□□□□□ -0.56
USP9X-201ENST00000324545 PPARGC1BQ86YN6 1023 aaKnown RBP11.52□□□□□ -0.57
USP9X-201ENST00000324545 CCER1Q8TC90 406 aaPredicted RBP11.47□□□□□ -0.57
USP9X-201ENST00000324545 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
USP9X-201ENST00000324545 NEFLP07196 543 aa11.39□□□□□ -0.59
USP9X-201ENST00000324545 SLC4A1APQ9BWU0 796 aaKnown RBP11.37□□□□□ -0.59
USP9X-201ENST00000324545 DAXXQ9UER7 740 aaPredicted RBP11.36□□□□□ -0.59
USP9X-201ENST00000324545 MYT1LQ9UL68 1186 aa11.35□□□□□ -0.59
USP9X-201ENST00000324545 CENPBP07199 599 aaPredicted RBP11.31□□□□□ -0.6
USP9X-201ENST00000324545 ITGAEP38570 1179 aa11.23□□□□□ -0.61
USP9X-201ENST00000324545 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
USP9X-201ENST00000324545 SLC24A1O60721 1099 aa11.12□□□□□ -0.63
USP9X-201ENST00000324545 CLSPNQ9HAW4 1339 aa11.11□□□□□ -0.63
USP9X-201ENST00000324545 UBTFP17480 764 aaKnown RBP11.1□□□□□ -0.63
USP9X-201ENST00000324545 BCANQ96GW7 911 aa11.08□□□□□ -0.64
USP9X-201ENST00000324545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.05□□□□□ -0.64
USP9X-201ENST00000324545 HNRNPUL2Q1KMD3 747 aaKnown RBP11.05□□□□□ -0.64
USP9X-201ENST00000324545 RTL5Q5HYW3 569 aaPredicted RBP10.96□□□□□ -0.65
USP9X-201ENST00000324545 PLPPR3Q6T4P5 718 aa10.96□□□□□ -0.65
USP9X-201ENST00000324545 ARXQ96QS3 562 aa10.86□□□□□ -0.67
USP9X-201ENST00000324545 NISCHQ9Y2I1 1504 aa10.86□□□□□ -0.67
USP9X-201ENST00000324545 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
USP9X-201ENST00000324545 EIF5BO60841 1220 aaKnown RBP10.82□□□□□ -0.68
USP9X-201ENST00000324545 NPM2Q86SE8 214 aaKnown RBP10.8□□□□□ -0.68
USP9X-201ENST00000324545 ZNF326Q5BKZ1 582 aaKnown RBP10.79□□□□□ -0.68
USP9X-201ENST00000324545 PLEKHG5O94827 1062 aa10.79□□□□□ -0.68
USP9X-201ENST00000324545 TULP1O00294 542 aaPredicted RBP10.78□□□□□ -0.68
USP9X-201ENST00000324545 SENP3Q9H4L4 574 aaPredicted RBP10.76□□□□□ -0.69
USP9X-201ENST00000324545 ZEB1P37275 1124 aaPredicted RBP10.73□□□□□ -0.69
USP9X-201ENST00000324545 A0A0G2JS52 829 aa10.72□□□□□ -0.69
USP9X-201ENST00000324545 NEUROD1Q13562 356 aa10.71□□□□□ -0.69
USP9X-201ENST00000324545 CANXP27824 592 aaKnown RBP10.71□□□□□ -0.7
USP9X-201ENST00000324545 NCBP3Q53F19 620 aaKnown RBP10.7□□□□□ -0.7
USP9X-201ENST00000324545 ZBTB47Q9UFB7 747 aaPredicted RBP10.68□□□□□ -0.7
USP9X-201ENST00000324545 TPRNQ4KMQ1 711 aa10.66□□□□□ -0.7
USP9X-201ENST00000324545 HRCP23327 699 aa10.62□□□□□ -0.71
USP9X-201ENST00000324545 ARID3CA6NKF2 412 aa10.62□□□□□ -0.71
USP9X-201ENST00000324545 FAM50AQ14320 339 aaKnown RBP10.6□□□□□ -0.71
USP9X-201ENST00000324545 AMER1Q5JTC6 1135 aaPredicted RBP10.59□□□□□ -0.71
USP9X-201ENST00000324545 LOC105371045A0A1W2PR82 267 aa10.58□□□□□ -0.72
USP9X-201ENST00000324545 TRIM52Q96A61 297 aa10.58□□□□□ -0.72
USP9X-201ENST00000324545 NBR1Q14596 966 aa10.58□□□□□ -0.72
USP9X-201ENST00000324545 TAOK2Q9UL54 1235 aa10.56□□□□□ -0.72
USP9X-201ENST00000324545 SCAF1Q9H7N4 1312 aaKnown RBP10.55□□□□□ -0.72
USP9X-201ENST00000324545 SENP3-EIF4A1A0A087X0R7 540 aa10.51□□□□□ -0.73
USP9X-201ENST00000324545 HSP90AA1P07900 732 aaKnown RBP10.5□□□□□ -0.73
USP9X-201ENST00000324545 SALL2Q9Y467 1007 aaPredicted RBP10.5□□□□□ -0.73
USP9X-201ENST00000324545 GTF3C3Q9Y5Q9 886 aa10.48□□□□□ -0.73
USP9X-201ENST00000324545 CDK11AQ9UQ88 783 aaPredicted RBP10.47□□□□□ -0.73
USP9X-201ENST00000324545 ZBTB7CA1YPR0 619 aa10.47□□□□□ -0.73
USP9X-201ENST00000324545 DIEXFQ68CQ4 756 aaKnown RBP10.47□□□□□ -0.73
USP9X-201ENST00000324545 KAT6BQ8WYB5 2073 aa10.46□□□□□ -0.74
USP9X-201ENST00000324545 FBLN2P98095 1184 aa10.4□□□□□ -0.74
USP9X-201ENST00000324545 TRIM26Q12899 539 aaPredicted RBP10.39□□□□□ -0.75
USP9X-201ENST00000324545 IRX6P78412 446 aaPredicted RBP10.36□□□□□ -0.75
USP9X-201ENST00000324545 ANO8Q9HCE9 1232 aaPredicted RBP10.35□□□□□ -0.75
USP9X-201ENST00000324545 ANP32AP39687 249 aaKnown RBP10.35□□□□□ -0.75
USP9X-201ENST00000324545 ANP32BQ92688 251 aaKnown RBP10.35□□□□□ -0.75
USP9X-201ENST00000324545 CHGAP10645 457 aaKnown RBP10.34□□□□□ -0.75
USP9X-201ENST00000324545 ANP32CO43423 234 aa10.33□□□□□ -0.76
USP9X-201ENST00000324545 CDK11BP21127 795 aaKnown RBP10.32□□□□□ -0.76
USP9X-201ENST00000324545 RTN4Q9NQC3 1192 aaKnown RBP10.32□□□□□ -0.76
USP9X-201ENST00000324545 NEFMP07197 916 aa10.29□□□□□ -0.76
USP9X-201ENST00000324545 ARID4BQ4LE39 1312 aaPredicted RBP10.29□□□□□ -0.76
USP9X-201ENST00000324545 P3H3Q8IVL6 736 aa10.28□□□□□ -0.76
USP9X-201ENST00000324545 ARID3AQ99856 593 aa10.27□□□□□ -0.76
USP9X-201ENST00000324545 C14orf37Q86TY3 774 aa10.26□□□□□ -0.77
USP9X-201ENST00000324545 FBXO3Q9UK99 471 aa10.26□□□□□ -0.77
USP9X-201ENST00000324545 ZNF777Q9ULD5 760 aaPredicted RBP10.26□□□□□ -0.77
USP9X-201ENST00000324545 PDE4CQ08493 712 aa10.26□□□□□ -0.77
USP9X-201ENST00000324545 CLSTN1O94985 981 aa10.25□□□□□ -0.77
USP9X-201ENST00000324545 STAG3Q9UJ98 1225 aa10.24□□□□□ -0.77
USP9X-201ENST00000324545 FKBP8Q14318 412 aa10.21□□□□□ -0.78
USP9X-201ENST00000324545 FAM9BQ8IZU0 186 aa10.21□□□□□ -0.78
USP9X-201ENST00000324545 NCLP19338 710 aaKnown RBP10.19□□□□□ -0.78
USP9X-201ENST00000324545 PRM3Q9NNZ6 103 aa10.18□□□□□ -0.78
USP9X-201ENST00000324545 ERICH6BQ5W0A0 696 aa10.17□□□□□ -0.78
USP9X-201ENST00000324545 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.15□□□□□ -0.78
USP9X-201ENST00000324545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.14□□□□□ -0.792e-6■■■■□ 22.6
USP9X-201ENST00000324545 ESF1Q9H501 851 aaKnown RBP10.14□□□□□ -0.79
USP9X-201ENST00000324545 HIRIP3Q9BW71 556 aaPredicted RBP10.14□□□□□ -0.79
USP9X-201ENST00000324545 GLIPR1L2Q4G1C9 344 aa10.13□□□□□ -0.79
USP9X-201ENST00000324545 PTMAP06454 111 aaKnown RBP10.11□□□□□ -0.79
USP9X-201ENST00000324545 NAP1L2Q9ULW6 460 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms