RNA–Protein interactions for RNA: ENST00000414487.6

SNRPE-202, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPE, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-202ENST00000414487 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
SNRPE-202ENST00000414487 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
SNRPE-202ENST00000414487 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
SNRPE-202ENST00000414487 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
SNRPE-202ENST00000414487 NISCHQ9Y2I1 1504 aa19.56■□□□□ 0.72
SNRPE-202ENST00000414487 FOXD1Q16676 465 aa19.46■□□□□ 0.71
SNRPE-202ENST00000414487 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
SNRPE-202ENST00000414487 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
SNRPE-202ENST00000414487 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
SNRPE-202ENST00000414487 MSH5O43196 834 aa18.15■□□□□ 0.5
SNRPE-202ENST00000414487 ADRA2BP18089 450 aa18.15■□□□□ 0.5
SNRPE-202ENST00000414487 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
SNRPE-202ENST00000414487 CCDC180Q9P1Z9 1646 aa16.8■□□□□ 0.28
SNRPE-202ENST00000414487 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
SNRPE-202ENST00000414487 ZCCHC6Q5VYS8 1495 aaKnown RBP16.57■□□□□ 0.24
SNRPE-202ENST00000414487 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
SNRPE-202ENST00000414487 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
SNRPE-202ENST00000414487 SHROOM4Q9ULL8 1493 aa16.33■□□□□ 0.2
SNRPE-202ENST00000414487 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
SNRPE-202ENST00000414487 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.19
SNRPE-202ENST00000414487 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
SNRPE-202ENST00000414487 SUPT5HO00267 1087 aaKnown RBP15.98■□□□□ 0.15
SNRPE-202ENST00000414487 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
SNRPE-202ENST00000414487 DCAF8L2P0C7V8 631 aa15.87■□□□□ 0.13
SNRPE-202ENST00000414487 RNF216Q9NWF9 866 aaPredicted RBP15.84■□□□□ 0.13
SNRPE-202ENST00000414487 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
SNRPE-202ENST00000414487 MYO15BQ96JP2 1530 aa15.79■□□□□ 0.12
SNRPE-202ENST00000414487 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
SNRPE-202ENST00000414487 ABCC9O60706 1549 aa15.63■□□□□ 0.09
SNRPE-202ENST00000414487 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
SNRPE-202ENST00000414487 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
SNRPE-202ENST00000414487 SCRIBQ14160 1630 aa15.51■□□□□ 0.07
SNRPE-202ENST00000414487 NACADO15069 1562 aa15.51■□□□□ 0.07
SNRPE-202ENST00000414487 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
SNRPE-202ENST00000414487 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
SNRPE-202ENST00000414487 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
SNRPE-202ENST00000414487 RB1CC1Q8TDY2 1594 aa15.29■□□□□ 0.04
SNRPE-202ENST00000414487 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
SNRPE-202ENST00000414487 KCNA4P22459 653 aa15.21■□□□□ 0.03
SNRPE-202ENST00000414487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNRPE-202ENST00000414487 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
SNRPE-202ENST00000414487 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
SNRPE-202ENST00000414487 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
SNRPE-202ENST00000414487 HRCP23327 699 aa15.06■□□□□ 0
SNRPE-202ENST00000414487 LOC105371045A0A1W2PR82 267 aa15.02■□□□□ -0
SNRPE-202ENST00000414487 WIZO95785 1651 aa15.02□□□□□ -0.01
SNRPE-202ENST00000414487 TRIM41Q8WV44 630 aa14.99□□□□□ -0.01
SNRPE-202ENST00000414487 PCGF6Q9BYE7 350 aa14.95□□□□□ -0.02
SNRPE-202ENST00000414487 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
SNRPE-202ENST00000414487 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
SNRPE-202ENST00000414487 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
SNRPE-202ENST00000414487 UNC13AQ9UPW8 1703 aa14.9□□□□□ -0.02
SNRPE-202ENST00000414487 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
SNRPE-202ENST00000414487 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
SNRPE-202ENST00000414487 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
SNRPE-202ENST00000414487 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
SNRPE-202ENST00000414487 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.05
SNRPE-202ENST00000414487 CCDC88BA6NC98 1476 aa14.76□□□□□ -0.05
SNRPE-202ENST00000414487 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
SNRPE-202ENST00000414487 PEG3Q9GZU2 1588 aa14.72□□□□□ -0.05
SNRPE-202ENST00000414487 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
SNRPE-202ENST00000414487 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
SNRPE-202ENST00000414487 EEA1Q15075 1411 aa14.61□□□□□ -0.07
SNRPE-202ENST00000414487 CAPN15O75808 1086 aa14.6□□□□□ -0.07
SNRPE-202ENST00000414487 ZEB1P37275 1124 aaPredicted RBP14.59□□□□□ -0.07
SNRPE-202ENST00000414487 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
SNRPE-202ENST00000414487 DSG3P32926 999 aa14.55□□□□□ -0.08
SNRPE-202ENST00000414487 PPARGC1BQ86YN6 1023 aaKnown RBP14.55□□□□□ -0.08
SNRPE-202ENST00000414487 ATAD2BQ9ULI0 1458 aa14.53□□□□□ -0.08
SNRPE-202ENST00000414487 WRNQ14191 1432 aaPredicted RBP eCLIP14.51□□□□□ -0.09
SNRPE-202ENST00000414487 TNIKQ9UKE5 1360 aa14.48□□□□□ -0.09
SNRPE-202ENST00000414487 BAZ1BQ9UIG0 1483 aaKnown RBP14.47□□□□□ -0.09
SNRPE-202ENST00000414487 SOGA1O94964 1423 aa14.47□□□□□ -0.09
SNRPE-202ENST00000414487 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
SNRPE-202ENST00000414487 CEP162Q5TB80 1403 aa14.43□□□□□ -0.1
SNRPE-202ENST00000414487 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
SNRPE-202ENST00000414487 GOLGA3Q08378 1498 aa14.42□□□□□ -0.1
SNRPE-202ENST00000414487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
SNRPE-202ENST00000414487 APLP2Q06481 763 aa14.41□□□□□ -0.1
SNRPE-202ENST00000414487 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
SNRPE-202ENST00000414487 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
SNRPE-202ENST00000414487 KIF21BO75037 1637 aa14.38□□□□□ -0.11
SNRPE-202ENST00000414487 RUSC2Q8N2Y8 1516 aa14.37□□□□□ -0.11
SNRPE-202ENST00000414487 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
SNRPE-202ENST00000414487 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
SNRPE-202ENST00000414487 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
SNRPE-202ENST00000414487 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
SNRPE-202ENST00000414487 HMGXB3Q12766 1538 aa14.35□□□□□ -0.11
SNRPE-202ENST00000414487 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
SNRPE-202ENST00000414487 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
SNRPE-202ENST00000414487 ABCB7O75027 752 aa14.29□□□□□ -0.12
SNRPE-202ENST00000414487 MYCNP04198 464 aaPredicted RBP14.29□□□□□ -0.12
SNRPE-202ENST00000414487 TOP2BQ02880 1626 aa14.29□□□□□ -0.12
SNRPE-202ENST00000414487 BIVM-ERCC5R4GMW8 1640 aa14.27□□□□□ -0.12
SNRPE-202ENST00000414487 UBTFP17480 764 aaKnown RBP14.26□□□□□ -0.13
SNRPE-202ENST00000414487 CLIP1P30622 1438 aa14.19□□□□□ -0.14
SNRPE-202ENST00000414487 ERICH3Q5RHP9 1530 aa14.17□□□□□ -0.14
SNRPE-202ENST00000414487 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
SNRPE-202ENST00000414487 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
SNRPE-202ENST00000414487 CFTRP13569 1480 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms