RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 MYT1Q01538 1121 aa13.81□□□□□ -0.2
RSF1-201ENST00000308488 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
RSF1-201ENST00000308488 TTBK1Q5TCY1 1321 aaPredicted RBP12.85□□□□□ -0.35
RSF1-201ENST00000308488 CENPBP07199 599 aaPredicted RBP12.49□□□□□ -0.41
RSF1-201ENST00000308488 ERICH6Q7L0X2 663 aa12.48□□□□□ -0.41
RSF1-201ENST00000308488 ZEB1P37275 1124 aaPredicted RBP12.29□□□□□ -0.44
RSF1-201ENST00000308488 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.45
RSF1-201ENST00000308488 HRCP23327 699 aa12.14□□□□□ -0.47
RSF1-201ENST00000308488 PCGF6Q9BYE7 350 aa12.06□□□□□ -0.48
RSF1-201ENST00000308488 YTHDC1Q96MU7 727 aaKnown RBP12.01□□□□□ -0.49
RSF1-201ENST00000308488 NEFLP07196 543 aa11.86□□□□□ -0.51
RSF1-201ENST00000308488 RTL5Q5HYW3 569 aaPredicted RBP11.69□□□□□ -0.54
RSF1-201ENST00000308488 MYT1LQ9UL68 1186 aa11.67□□□□□ -0.54
RSF1-201ENST00000308488 GLIPR1L2Q4G1C9 344 aa11.66□□□□□ -0.54
RSF1-201ENST00000308488 SUPT5HO00267 1087 aaKnown RBP11.64□□□□□ -0.55
RSF1-201ENST00000308488 GTF3C3Q9Y5Q9 886 aa11.58□□□□□ -0.56
RSF1-201ENST00000308488 ACIN1Q9UKV3 1341 aaKnown RBP11.57□□□□□ -0.56
RSF1-201ENST00000308488 BCL11AQ9H165 835 aa11.57□□□□□ -0.56
RSF1-201ENST00000308488 CLSPNQ9HAW4 1339 aa11.53□□□□□ -0.56
RSF1-201ENST00000308488 PPARGC1BQ86YN6 1023 aaKnown RBP11.52□□□□□ -0.56
RSF1-201ENST00000308488 TRIM26Q12899 539 aaPredicted RBP11.52□□□□□ -0.57
RSF1-201ENST00000308488 RANGAP1P46060 587 aaPredicted RBP11.45□□□□□ -0.58
RSF1-201ENST00000308488 SLC24A1O60721 1099 aa11.44□□□□□ -0.58
RSF1-201ENST00000308488 SCAF1Q9H7N4 1312 aaKnown RBP11.44□□□□□ -0.58
RSF1-201ENST00000308488 DAXXQ9UER7 740 aaPredicted RBP11.43□□□□□ -0.58
RSF1-201ENST00000308488 ANP32EQ9BTT0 268 aa11.38□□□□□ -0.59
RSF1-201ENST00000308488 EIF5BO60841 1220 aaKnown RBP11.37□□□□□ -0.59
RSF1-201ENST00000308488 DIEXFQ68CQ4 756 aaKnown RBP11.36□□□□□ -0.59
RSF1-201ENST00000308488 APLP2Q06481 763 aa11.27□□□□□ -0.61
RSF1-201ENST00000308488 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
RSF1-201ENST00000308488 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
RSF1-201ENST00000308488 CDK11AQ9UQ88 783 aaPredicted RBP11.22□□□□□ -0.61
RSF1-201ENST00000308488 NISCHQ9Y2I1 1504 aa11.16□□□□□ -0.62
RSF1-201ENST00000308488 SHROOM4Q9ULL8 1493 aa11.15□□□□□ -0.62
RSF1-201ENST00000308488 NEUROD1Q13562 356 aa11.12□□□□□ -0.63
RSF1-201ENST00000308488 ANP32AP39687 249 aaKnown RBP11.1□□□□□ -0.63
RSF1-201ENST00000308488 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
RSF1-201ENST00000308488 BCANQ96GW7 911 aa11.06□□□□□ -0.64
RSF1-201ENST00000308488 DCAF8L2P0C7V8 631 aa11.06□□□□□ -0.64
RSF1-201ENST00000308488 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
RSF1-201ENST00000308488 FAM9AQ8IZU1 332 aaPredicted RBP11□□□□□ -0.65
RSF1-201ENST00000308488 TNNT2P45379 298 aaPredicted RBP10.98□□□□□ -0.65
RSF1-201ENST00000308488 NCLP19338 710 aaKnown RBP10.97□□□□□ -0.65
RSF1-201ENST00000308488 DCAF1Q9Y4B6 1507 aa10.96□□□□□ -0.66
RSF1-201ENST00000308488 CCDC180Q9P1Z9 1646 aa10.9□□□□□ -0.66
RSF1-201ENST00000308488 NBR1Q14596 966 aa10.9□□□□□ -0.66
RSF1-201ENST00000308488 CSRNP3Q8WYN3 585 aa10.9□□□□□ -0.67
RSF1-201ENST00000308488 DEKP35659 375 aaKnown RBP10.86□□□□□ -0.67
RSF1-201ENST00000308488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.86□□□□□ -0.67
RSF1-201ENST00000308488 ANP32BQ92688 251 aaKnown RBP10.84□□□□□ -0.67
RSF1-201ENST00000308488 TRIM41Q8WV44 630 aa10.83□□□□□ -0.68
RSF1-201ENST00000308488 CHIC1Q5VXU3 224 aa10.83□□□□□ -0.68
RSF1-201ENST00000308488 ZBTB47Q9UFB7 747 aaPredicted RBP10.83□□□□□ -0.68
RSF1-201ENST00000308488 PODXL2Q9NZ53 605 aa10.82□□□□□ -0.68
RSF1-201ENST00000308488 PKNOX2Q96KN3 472 aa10.81□□□□□ -0.68
RSF1-201ENST00000308488 CDK11BP21127 795 aaKnown RBP10.81□□□□□ -0.68
RSF1-201ENST00000308488 NEFMP07197 916 aa10.8□□□□□ -0.68
RSF1-201ENST00000308488 FKBP8Q14318 412 aa10.79□□□□□ -0.68
RSF1-201ENST00000308488 TRIM44Q96DX7 344 aaPredicted RBP10.78□□□□□ -0.68
RSF1-201ENST00000308488 ZNF326Q5BKZ1 582 aaKnown RBP10.78□□□□□ -0.68
RSF1-201ENST00000308488 NAP1L5Q96NT1 182 aaPredicted RBP10.75□□□□□ -0.69
RSF1-201ENST00000308488 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
RSF1-201ENST00000308488 RTN4Q9NQC3 1192 aaKnown RBP10.73□□□□□ -0.69
RSF1-201ENST00000308488 ANP32CO43423 234 aa10.73□□□□□ -0.69
RSF1-201ENST00000308488 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.72□□□□□ -0.69
RSF1-201ENST00000308488 NOP58Q9Y2X3 529 aaKnown RBP10.71□□□□□ -0.7
RSF1-201ENST00000308488 PPM1GO15355 546 aaPredicted RBP10.7□□□□□ -0.7
RSF1-201ENST00000308488 NPM2Q86SE8 214 aaKnown RBP10.69□□□□□ -0.7
RSF1-201ENST00000308488 HSP90AA1P07900 732 aaKnown RBP10.69□□□□□ -0.7
RSF1-201ENST00000308488 LOC105371045A0A1W2PR82 267 aa10.68□□□□□ -0.7
RSF1-201ENST00000308488 DDRGK1Q96HY6 314 aa10.67□□□□□ -0.7
RSF1-201ENST00000308488 SUPT16HQ9Y5B9 1047 aaKnown RBP10.64□□□□□ -0.71
RSF1-201ENST00000308488 CCDC136Q96JN2 1154 aa10.62□□□□□ -0.71
RSF1-201ENST00000308488 UBTFP17480 764 aaKnown RBP10.61□□□□□ -0.71
RSF1-201ENST00000308488 VSIG10Q8N0Z9 540 aa10.6□□□□□ -0.71
RSF1-201ENST00000308488 PTMSP20962 102 aa10.59□□□□□ -0.71
RSF1-201ENST00000308488 UBE2Q2Q8WVN8 375 aa10.59□□□□□ -0.71
RSF1-201ENST00000308488 HSP90AA2PQ14568 343 aaPredicted RBP10.58□□□□□ -0.72
RSF1-201ENST00000308488 TSHZ2Q9NRE2 1034 aa10.58□□□□□ -0.72
RSF1-201ENST00000308488 HNRNPUL2Q1KMD3 747 aaKnown RBP10.57□□□□□ -0.72
RSF1-201ENST00000308488 L1TD1Q5T7N2 865 aaKnown RBP10.57□□□□□ -0.72
RSF1-201ENST00000308488 CNGB1Q14028 1251 aaPredicted RBP10.57□□□□□ -0.72
RSF1-201ENST00000308488 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
RSF1-201ENST00000308488 MIER1Q8N108 512 aa10.56□□□□□ -0.72
RSF1-201ENST00000308488 A0A0U1RQG5 324 aaPredicted RBP10.54□□□□□ -0.72
RSF1-201ENST00000308488 POLR3GLQ9BT43 218 aa10.52□□□□□ -0.72
RSF1-201ENST00000308488 ITGAEP38570 1179 aa10.52□□□□□ -0.73
RSF1-201ENST00000308488 PNNQ9H307 717 aaKnown RBP10.52□□□□□ -0.73
RSF1-201ENST00000308488 ANO8Q9HCE9 1232 aaPredicted RBP10.49□□□□□ -0.73
RSF1-201ENST00000308488 UPF2Q9HAU5 1272 aaKnown RBP10.49□□□□□ -0.73
RSF1-201ENST00000308488 BECN1Q14457 450 aa10.48□□□□□ -0.73
RSF1-201ENST00000308488 LAS1LQ9Y4W2 734 aaKnown RBP10.45□□□□□ -0.74
RSF1-201ENST00000308488 PDE4CQ08493 712 aa10.44□□□□□ -0.74
RSF1-201ENST00000308488 USP35Q9P2H5 1018 aa10.44□□□□□ -0.74
RSF1-201ENST00000308488 FANCIQ9NVI1 1328 aa10.43□□□□□ -0.74
RSF1-201ENST00000308488 PPP4R2Q9NY27 417 aa10.43□□□□□ -0.74
RSF1-201ENST00000308488 ARXQ96QS3 562 aa10.42□□□□□ -0.74
RSF1-201ENST00000308488 HNRNPUQ00839 825 aaKnown RBP eCLIP10.39□□□□□ -0.75
RSF1-201ENST00000308488 SALL2Q9Y467 1007 aaPredicted RBP10.39□□□□□ -0.75
RSF1-201ENST00000308488 CANXP27824 592 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms