RNA–Protein interactions for RNA: ENST00000309042.11

REST-201, Transcript of RE1 silencing transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene REST, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REST-201ENST00000309042 NISCHQ9Y2I1 1504 aa11.94□□□□□ -0.5
REST-201ENST00000309042 SUPT5HO00267 1087 aaKnown RBP11.85□□□□□ -0.51
REST-201ENST00000309042 SHROOM4Q9ULL8 1493 aa11.72□□□□□ -0.53
REST-201ENST00000309042 PCGF6Q9BYE7 350 aa11.7□□□□□ -0.54
REST-201ENST00000309042 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
REST-201ENST00000309042 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
REST-201ENST00000309042 PPARGC1BQ86YN6 1023 aaKnown RBP11.45□□□□□ -0.58
REST-201ENST00000309042 HRCP23327 699 aa11.42□□□□□ -0.58
REST-201ENST00000309042 PELP1Q8IZL8 1130 aaKnown RBP11.36□□□□□ -0.59
REST-201ENST00000309042 FAM9AQ8IZU1 332 aaPredicted RBP11.14□□□□□ -0.63
REST-201ENST00000309042 TTBK1Q5TCY1 1321 aaPredicted RBP11.13□□□□□ -0.63
REST-201ENST00000309042 LOC105371045A0A1W2PR82 267 aa11.1□□□□□ -0.63
REST-201ENST00000309042 YTHDC1Q96MU7 727 aaKnown RBP11.04□□□□□ -0.64
REST-201ENST00000309042 CENPBP07199 599 aaPredicted RBP11.03□□□□□ -0.64
REST-201ENST00000309042 ZEB1P37275 1124 aaPredicted RBP11.01□□□□□ -0.65
REST-201ENST00000309042 CCER1Q8TC90 406 aaPredicted RBP11□□□□□ -0.65
REST-201ENST00000309042 MYT1Q01538 1121 aa11□□□□□ -0.65
REST-201ENST00000309042 TRIM26Q12899 539 aaPredicted RBP11□□□□□ -0.65
REST-201ENST00000309042 CHIC1Q5VXU3 224 aa10.96□□□□□ -0.66
REST-201ENST00000309042 GTF3C3Q9Y5Q9 886 aa10.85□□□□□ -0.67
REST-201ENST00000309042 SCAF1Q9H7N4 1312 aaKnown RBP10.85□□□□□ -0.67
REST-201ENST00000309042 TRIM41Q8WV44 630 aa10.8□□□□□ -0.68
REST-201ENST00000309042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.78□□□□□ -0.68
REST-201ENST00000309042 DIEXFQ68CQ4 756 aaKnown RBP10.75□□□□□ -0.69
REST-201ENST00000309042 ACIN1Q9UKV3 1341 aaKnown RBP10.69□□□□□ -0.7
REST-201ENST00000309042 MYO15BQ96JP2 1530 aa10.67□□□□□ -0.7
REST-201ENST00000309042 NEUROD1Q13562 356 aa10.66□□□□□ -0.7
REST-201ENST00000309042 RANGAP1P46060 587 aaPredicted RBP10.65□□□□□ -0.7
REST-201ENST00000309042 ERICH6Q7L0X2 663 aa10.62□□□□□ -0.71
REST-201ENST00000309042 APLP2Q06481 763 aa10.57□□□□□ -0.72
REST-201ENST00000309042 UBTFP17480 764 aaKnown RBP10.52□□□□□ -0.73
REST-201ENST00000309042 HNRNPUL2Q1KMD3 747 aaKnown RBP10.5□□□□□ -0.73
REST-201ENST00000309042 BCANQ96GW7 911 aa10.48□□□□□ -0.73
REST-201ENST00000309042 NEFLP07196 543 aa10.46□□□□□ -0.73
REST-201ENST00000309042 DCAF1Q9Y4B6 1507 aa10.44□□□□□ -0.74
REST-201ENST00000309042 ZNF316A6NFI3 1004 aaPredicted RBP10.38□□□□□ -0.75
REST-201ENST00000309042 ITGAEP38570 1179 aa10.34□□□□□ -0.75
REST-201ENST00000309042 CCDC180Q9P1Z9 1646 aa10.31□□□□□ -0.76
REST-201ENST00000309042 MIER1Q8N108 512 aa10.3□□□□□ -0.76
REST-201ENST00000309042 ATP1B4Q9UN42 357 aaPredicted RBP10.26□□□□□ -0.77
REST-201ENST00000309042 CNGB1Q14028 1251 aaPredicted RBP10.23□□□□□ -0.77
REST-201ENST00000309042 BCL11AQ9H165 835 aa10.2□□□□□ -0.78
REST-201ENST00000309042 FKBP8Q14318 412 aa10.19□□□□□ -0.78
REST-201ENST00000309042 ANP32EQ9BTT0 268 aa10.14□□□□□ -0.79
REST-201ENST00000309042 CDK11AQ9UQ88 783 aaPredicted RBP10.09□□□□□ -0.79
REST-201ENST00000309042 RTL5Q5HYW3 569 aaPredicted RBP10.08□□□□□ -0.8
REST-201ENST00000309042 NBR1Q14596 966 aa10.07□□□□□ -0.8
REST-201ENST00000309042 TRIM52Q96A61 297 aa10.07□□□□□ -0.8
REST-201ENST00000309042 POLR3GLQ9BT43 218 aa10.07□□□□□ -0.8
REST-201ENST00000309042 SUPT16HQ9Y5B9 1047 aaKnown RBP10.06□□□□□ -0.8
REST-201ENST00000309042 CSRNP3Q8WYN3 585 aa10.05□□□□□ -0.8
REST-201ENST00000309042 IRX6P78412 446 aaPredicted RBP10.04□□□□□ -0.8
REST-201ENST00000309042 DDX10Q13206 875 aaKnown RBP10.02□□□□□ -0.8
REST-201ENST00000309042 HIRIP3Q9BW71 556 aaPredicted RBP10□□□□□ -0.81
REST-201ENST00000309042 ANP32CO43423 234 aa9.99□□□□□ -0.81
REST-201ENST00000309042 EIF5BO60841 1220 aaKnown RBP9.99□□□□□ -0.81
REST-201ENST00000309042 ZCCHC6Q5VYS8 1495 aaKnown RBP9.98□□□□□ -0.81
REST-201ENST00000309042 DAXXQ9UER7 740 aaPredicted RBP9.97□□□□□ -0.81
REST-201ENST00000309042 TSHZ2Q9NRE2 1034 aa9.95□□□□□ -0.82
REST-201ENST00000309042 FAM50AQ14320 339 aaKnown RBP9.95□□□□□ -0.82
REST-201ENST00000309042 CLSPNQ9HAW4 1339 aa9.95□□□□□ -0.82
REST-201ENST00000309042 NPM2Q86SE8 214 aaKnown RBP9.93□□□□□ -0.82
REST-201ENST00000309042 RTN4Q9NQC3 1192 aaKnown RBP9.92□□□□□ -0.82
REST-201ENST00000309042 HNRNPUQ00839 825 aaKnown RBP eCLIP9.91□□□□□ -0.82
REST-201ENST00000309042 RBM19Q9Y4C8 960 aaKnown RBP9.9□□□□□ -0.82
REST-201ENST00000309042 ANP32AP39687 249 aaKnown RBP9.86□□□□□ -0.83
REST-201ENST00000309042 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
REST-201ENST00000309042 KCNH8Q96L42 1107 aa9.85□□□□□ -0.83
REST-201ENST00000309042 SENP3-EIF4A1A0A087X0R7 540 aa9.84□□□□□ -0.83
REST-201ENST00000309042 FAM9BQ8IZU0 186 aa9.83□□□□□ -0.84
REST-201ENST00000309042 DEKP35659 375 aaKnown RBP9.81□□□□□ -0.84
REST-201ENST00000309042 CEP162Q5TB80 1403 aa9.79□□□□□ -0.84
REST-201ENST00000309042 ZBTB47Q9UFB7 747 aaPredicted RBP9.79□□□□□ -0.84
REST-201ENST00000309042 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.78□□□□□ -0.84
REST-201ENST00000309042 SALL2Q9Y467 1007 aaPredicted RBP9.76□□□□□ -0.85
REST-201ENST00000309042 B4GALNT3Q6L9W6 998 aa9.75□□□□□ -0.85
REST-201ENST00000309042 RB1CC1Q8TDY2 1594 aa9.75□□□□□ -0.85
REST-201ENST00000309042 CCDC136Q96JN2 1154 aa9.74□□□□□ -0.85
REST-201ENST00000309042 ARXQ96QS3 562 aa9.74□□□□□ -0.85
REST-201ENST00000309042 P3H3Q8IVL6 736 aa9.74□□□□□ -0.85
REST-201ENST00000309042 RSF1Q96T23 1441 aaPredicted RBP9.73□□□□□ -0.85
REST-201ENST00000309042 MYT1LQ9UL68 1186 aa9.73□□□□□ -0.85
REST-201ENST00000309042 ZNF326Q5BKZ1 582 aaKnown RBP9.72□□□□□ -0.85
REST-201ENST00000309042 LAS1LQ9Y4W2 734 aaKnown RBP9.69□□□□□ -0.86
REST-201ENST00000309042 SIN3AQ96ST3 1273 aa9.69□□□□□ -0.86
REST-201ENST00000309042 NOP58Q9Y2X3 529 aaKnown RBP9.68□□□□□ -0.86
REST-201ENST00000309042 TONSLQ96HA7 1378 aa9.66□□□□□ -0.86
REST-201ENST00000309042 PABPN1Q86U42 306 aaKnown RBP eCLIP9.65□□□□□ -0.86
REST-201ENST00000309042 MRS2Q9HD23 443 aa9.65□□□□□ -0.86
REST-201ENST00000309042 CLIP1P30622 1438 aa9.65□□□□□ -0.86
REST-201ENST00000309042 NEFMP07197 916 aa9.64□□□□□ -0.87
REST-201ENST00000309042 ABCC9O60706 1549 aa9.63□□□□□ -0.87
REST-201ENST00000309042 ANO8Q9HCE9 1232 aaPredicted RBP9.61□□□□□ -0.87
REST-201ENST00000309042 PRKCSHP14314 528 aaPredicted RBP9.61□□□□□ -0.87
REST-201ENST00000309042 ABCC8Q09428 1581 aa9.61□□□□□ -0.87
REST-201ENST00000309042 SOGA1O94964 1423 aa9.6□□□□□ -0.87
REST-201ENST00000309042 PPP4R2Q9NY27 417 aa9.6□□□□□ -0.87
REST-201ENST00000309042 TNIKQ9UKE5 1360 aa9.58□□□□□ -0.88
REST-201ENST00000309042 ARID3CA6NKF2 412 aa9.58□□□□□ -0.88
REST-201ENST00000309042 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms