RNA–Protein interactions for RNA: ENST00000416160.1

ITSN2-206, Transcript of intersectin 2, humanhuman

TSL 5

Gene ITSN2, Length 3,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-206ENST00000416160 DCAF8L2P0C7V8 631 aa9.65□□□□□ -0.86
ITSN2-206ENST00000416160 NISCHQ9Y2I1 1504 aa9.64□□□□□ -0.87
ITSN2-206ENST00000416160 ABCC9O60706 1549 aa9.12□□□□□ -0.95
ITSN2-206ENST00000416160 AEBP2Q6ZN18 517 aaPredicted RBP9□□□□□ -0.97
ITSN2-206ENST00000416160 PABPN1Q86U42 306 aaKnown RBP eCLIP8.87□□□□□ -0.99
ITSN2-206ENST00000416160 SHROOM4Q9ULL8 1493 aa8.7□□□□□ -1.02
ITSN2-206ENST00000416160 CHIC1Q5VXU3 224 aa8.51□□□□□ -1.05
ITSN2-206ENST00000416160 DNAJC5BQ9UF47 199 aa8.47□□□□□ -1.05
ITSN2-206ENST00000416160 SUPT5HO00267 1087 aaKnown RBP8.32□□□□□ -1.08
ITSN2-206ENST00000416160 POTEDQ86YR6 584 aa8.2□□□□□ -1.1
ITSN2-206ENST00000416160 EHMT2Q96KQ7 1210 aa8.16□□□□□ -1.1
ITSN2-206ENST00000416160 SCRIBQ14160 1630 aa8.14□□□□□ -1.11
ITSN2-206ENST00000416160 RB1CC1Q8TDY2 1594 aa8.13□□□□□ -1.11
ITSN2-206ENST00000416160 CCDC180Q9P1Z9 1646 aa8.11□□□□□ -1.11
ITSN2-206ENST00000416160 TTBK1Q5TCY1 1321 aaPredicted RBP8.1□□□□□ -1.11
ITSN2-206ENST00000416160 TRIM41Q8WV44 630 aa8.09□□□□□ -1.11
ITSN2-206ENST00000416160 FBLN2P98095 1184 aa8.08□□□□□ -1.12
ITSN2-206ENST00000416160 CECR2Q9BXF3 1484 aa8.01□□□□□ -1.13
ITSN2-206ENST00000416160 RANGAP1P46060 587 aaPredicted RBP7.99□□□□□ -1.13
ITSN2-206ENST00000416160 NACADO15069 1562 aa7.96□□□□□ -1.14
ITSN2-206ENST00000416160 ERCC6Q03468 1493 aa7.95□□□□□ -1.14
ITSN2-206ENST00000416160 TRHP20396 242 aaPredicted RBP7.88□□□□□ -1.15
ITSN2-206ENST00000416160 ZCCHC6Q5VYS8 1495 aaKnown RBP7.88□□□□□ -1.15
ITSN2-206ENST00000416160 FAM9AQ8IZU1 332 aaPredicted RBP7.88□□□□□ -1.15
ITSN2-206ENST00000416160 SENP3Q9H4L4 574 aaPredicted RBP7.82□□□□□ -1.16
ITSN2-206ENST00000416160 ATP1B4Q9UN42 357 aaPredicted RBP7.77□□□□□ -1.17
ITSN2-206ENST00000416160 CC2D2AQ9P2K1 1620 aa7.76□□□□□ -1.17
ITSN2-206ENST00000416160 CYB5RLQ6IPT4 315 aa7.74□□□□□ -1.17
ITSN2-206ENST00000416160 ARID3CA6NKF2 412 aa7.74□□□□□ -1.17
ITSN2-206ENST00000416160 PLPPR3Q6T4P5 718 aa7.73□□□□□ -1.17
ITSN2-206ENST00000416160 EIF4G1Q04637 1599 aaKnown RBP7.72□□□□□ -1.17
ITSN2-206ENST00000416160 NESP48681 1621 aa7.71□□□□□ -1.18
ITSN2-206ENST00000416160 BAZ1BQ9UIG0 1483 aaKnown RBP7.7□□□□□ -1.18
ITSN2-206ENST00000416160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.7□□□□□ -1.18
ITSN2-206ENST00000416160 HNRNPUL2Q1KMD3 747 aaKnown RBP7.7□□□□□ -1.18
ITSN2-206ENST00000416160 BICRAQ9NZM4 1560 aa7.68□□□□□ -1.18
ITSN2-206ENST00000416160 CHMP7Q8WUX9 453 aaPredicted RBP7.68□□□□□ -1.18
ITSN2-206ENST00000416160 SMARCA2P51531 1590 aa7.66□□□□□ -1.18
ITSN2-206ENST00000416160 DNAJC5Q9H3Z4 198 aa7.64□□□□□ -1.19
ITSN2-206ENST00000416160 MYT1LQ9UL68 1186 aa7.63□□□□□ -1.19
ITSN2-206ENST00000416160 OSCARQ8IYS5 282 aa7.62□□□□□ -1.19
ITSN2-206ENST00000416160 P3H3Q8IVL6 736 aa7.59□□□□□ -1.19
ITSN2-206ENST00000416160 ATAD2BQ9ULI0 1458 aa7.59□□□□□ -1.19
ITSN2-206ENST00000416160 MROH2BQ7Z745 1585 aa7.58□□□□□ -1.2
ITSN2-206ENST00000416160 TDRD9Q8NDG6 1382 aaKnown RBP7.56□□□□□ -1.2
ITSN2-206ENST00000416160 PDS5BQ9NTI5 1447 aa7.56□□□□□ -1.2
ITSN2-206ENST00000416160 UNC13AQ9UPW8 1703 aa7.55□□□□□ -1.2
ITSN2-206ENST00000416160 NPM1P06748 294 aaKnown RBP eCLIP7.54□□□□□ -1.2
ITSN2-206ENST00000416160 UBTFP17480 764 aaKnown RBP7.54□□□□□ -1.2
ITSN2-206ENST00000416160 CADPSQ9ULU8 1353 aa7.53□□□□□ -1.2
ITSN2-206ENST00000416160 RSF1Q96T23 1441 aaPredicted RBP7.51□□□□□ -1.21
ITSN2-206ENST00000416160 DCAF1Q9Y4B6 1507 aa7.51□□□□□ -1.21
ITSN2-206ENST00000416160 KCNH8Q96L42 1107 aa7.5□□□□□ -1.21
ITSN2-206ENST00000416160 MYO15BQ96JP2 1530 aa7.49□□□□□ -1.21
ITSN2-206ENST00000416160 BAZ1AQ9NRL2 1556 aaPredicted RBP7.49□□□□□ -1.21
ITSN2-206ENST00000416160 PHF23Q9BUL5 403 aaPredicted RBP7.48□□□□□ -1.21
ITSN2-206ENST00000416160 NCAPD3P42695 1498 aa7.45□□□□□ -1.22
ITSN2-206ENST00000416160 FANCD2Q9BXW9 1451 aa7.45□□□□□ -1.22
ITSN2-206ENST00000416160 WIZO95785 1651 aa7.44□□□□□ -1.22
ITSN2-206ENST00000416160 AQRO60306 1485 aaKnown RBP eCLIP7.44□□□□□ -1.22
ITSN2-206ENST00000416160 CEP164Q9UPV0 1460 aa7.44□□□□□ -1.22
ITSN2-206ENST00000416160 SMARCA4P51532 1647 aa7.42□□□□□ -1.22
ITSN2-206ENST00000416160 SOGA1O94964 1423 aa7.38□□□□□ -1.23
ITSN2-206ENST00000416160 PPARGC1BQ86YN6 1023 aaKnown RBP7.38□□□□□ -1.23
ITSN2-206ENST00000416160 CCDC88BA6NC98 1476 aa7.38□□□□□ -1.23
ITSN2-206ENST00000416160 ARID4BQ4LE39 1312 aaPredicted RBP7.38□□□□□ -1.23
ITSN2-206ENST00000416160 RAD54L2Q9Y4B4 1467 aa7.37□□□□□ -1.23
ITSN2-206ENST00000416160 MLECQ14165 292 aa7.36□□□□□ -1.23
ITSN2-206ENST00000416160 FAM69CQ0P6D2 419 aa7.36□□□□□ -1.23
ITSN2-206ENST00000416160 ZNF777Q9ULD5 760 aaPredicted RBP7.33□□□□□ -1.24
ITSN2-206ENST00000416160 ZNF608Q9ULD9 1512 aaPredicted RBP7.32□□□□□ -1.24
ITSN2-206ENST00000416160 MRC2Q9UBG0 1479 aa7.32□□□□□ -1.24
ITSN2-206ENST00000416160 FOXD1Q16676 465 aa7.31□□□□□ -1.24
ITSN2-206ENST00000416160 JPH4Q96JJ6 628 aa7.31□□□□□ -1.24
ITSN2-206ENST00000416160 CUX2O14529 1486 aa7.29□□□□□ -1.24
ITSN2-206ENST00000416160 APLP2Q06481 763 aa7.28□□□□□ -1.24
ITSN2-206ENST00000416160 ITGAEP38570 1179 aa7.28□□□□□ -1.24
ITSN2-206ENST00000416160 LOC105371045A0A1W2PR82 267 aa7.27□□□□□ -1.25
ITSN2-206ENST00000416160 WRNQ14191 1432 aaPredicted RBP eCLIP7.25□□□□□ -1.25
ITSN2-206ENST00000416160 MSH5O43196 834 aa7.25□□□□□ -1.25
ITSN2-206ENST00000416160 ESF1Q9H501 851 aaKnown RBP7.24□□□□□ -1.25
ITSN2-206ENST00000416160 ABCC8Q09428 1581 aa7.23□□□□□ -1.25
ITSN2-206ENST00000416160 SCAF1Q9H7N4 1312 aaKnown RBP7.23□□□□□ -1.25
ITSN2-206ENST00000416160 HMGXB3Q12766 1538 aa7.22□□□□□ -1.25
ITSN2-206ENST00000416160 URB2Q14146 1524 aaKnown RBP7.22□□□□□ -1.25
ITSN2-206ENST00000416160 CFTRP13569 1480 aa7.22□□□□□ -1.25
ITSN2-206ENST00000416160 FGD5Q6ZNL6 1462 aa7.21□□□□□ -1.25
ITSN2-206ENST00000416160 CSRNP3Q8WYN3 585 aa7.21□□□□□ -1.26
ITSN2-206ENST00000416160 TOP2AP11388 1531 aaKnown RBP7.2□□□□□ -1.26
ITSN2-206ENST00000416160 LAMC3Q9Y6N6 1575 aa7.2□□□□□ -1.26
ITSN2-206ENST00000416160 TOPBP1Q92547 1522 aa7.19□□□□□ -1.26
ITSN2-206ENST00000416160 SNAPC4Q5SXM2 1469 aa7.19□□□□□ -1.26
ITSN2-206ENST00000416160 BCANQ96GW7 911 aa7.19□□□□□ -1.26
ITSN2-206ENST00000416160 KIF21AQ7Z4S6 1674 aa7.18□□□□□ -1.26
ITSN2-206ENST00000416160 POLA1P09884 1462 aaPredicted RBP7.17□□□□□ -1.26
ITSN2-206ENST00000416160 GAPVD1Q14C86 1478 aa7.17□□□□□ -1.26
ITSN2-206ENST00000416160 CARMIL1Q5VZK9 1371 aa7.16□□□□□ -1.26
ITSN2-206ENST00000416160 PLEKHG5O94827 1062 aa7.15□□□□□ -1.26
ITSN2-206ENST00000416160 IFT140Q96RY7 1462 aa7.15□□□□□ -1.26
ITSN2-206ENST00000416160 PLEKHD1A6NEE1 506 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms