Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV9A0A0B4J1U6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV9A0A0B4J1U6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV9A0A0B4J1U6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRBV9A0A0B4J1U6 AL139125.2-201ENST00000623134 1869 ntBASIC18.5■□□□□ 0.55
TRBV9A0A0B4J1U6 AC022211.4-201ENST00000625094 2161 ntBASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV9A0A0B4J1U6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV9A0A0B4J1U6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV9A0A0B4J1U6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV9A0A0B4J1U6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV9A0A0B4J1U6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV9A0A0B4J1U6 AC068473.5-201ENST00000616428 2072 ntBASIC18.48■□□□□ 0.55
TRBV9A0A0B4J1U6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRBV9A0A0B4J1U6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRBV9A0A0B4J1U6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.47■□□□□ 0.55
TRBV9A0A0B4J1U6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV9A0A0B4J1U6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.47■□□□□ 0.55
TRBV9A0A0B4J1U6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV9A0A0B4J1U6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRBV9A0A0B4J1U6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV9A0A0B4J1U6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRBV9A0A0B4J1U6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV9A0A0B4J1U6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV9A0A0B4J1U6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV9A0A0B4J1U6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV9A0A0B4J1U6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV9A0A0B4J1U6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV9A0A0B4J1U6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV9A0A0B4J1U6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV9A0A0B4J1U6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV9A0A0B4J1U6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV9A0A0B4J1U6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.45■□□□□ 0.54
TRBV9A0A0B4J1U6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV9A0A0B4J1U6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.45■□□□□ 0.54
TRBV9A0A0B4J1U6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV9A0A0B4J1U6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV9A0A0B4J1U6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.45■□□□□ 0.54
TRBV9A0A0B4J1U6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV9A0A0B4J1U6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 FOXO3B-201ENST00000395675 1928 ntBASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV9A0A0B4J1U6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 ATP5G2P3-201ENST00000429083 425 ntBASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV9A0A0B4J1U6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV9A0A0B4J1U6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV9A0A0B4J1U6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV9A0A0B4J1U6 AC004987.1-201ENST00000428627 508 ntBASIC18.42■□□□□ 0.54
TRBV9A0A0B4J1U6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRBV9A0A0B4J1U6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV9A0A0B4J1U6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV9A0A0B4J1U6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV9A0A0B4J1U6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV9A0A0B4J1U6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV9A0A0B4J1U6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV9A0A0B4J1U6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms