Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PDZRN3Q9UPQ7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PDZRN3Q9UPQ7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.29■■■□□ 2.44
PDZRN3Q9UPQ7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.29■■■□□ 2.44
PDZRN3Q9UPQ7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.29■■■□□ 2.44
PDZRN3Q9UPQ7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
PDZRN3Q9UPQ7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PDZRN3Q9UPQ7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PDZRN3Q9UPQ7 MIR638-201ENST00000385237 100 ntBASIC30.28■■■□□ 2.44
PDZRN3Q9UPQ7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PDZRN3Q9UPQ7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.28■■■□□ 2.44
PDZRN3Q9UPQ7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.28■■■□□ 2.44
PDZRN3Q9UPQ7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PDZRN3Q9UPQ7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
PDZRN3Q9UPQ7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
PDZRN3Q9UPQ7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
PDZRN3Q9UPQ7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
PDZRN3Q9UPQ7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
PDZRN3Q9UPQ7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
PDZRN3Q9UPQ7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PDZRN3Q9UPQ7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.26■■■□□ 2.43
PDZRN3Q9UPQ7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.26■■■□□ 2.43
PDZRN3Q9UPQ7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.26■■■□□ 2.43
PDZRN3Q9UPQ7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PDZRN3Q9UPQ7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.26■■■□□ 2.43
PDZRN3Q9UPQ7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PDZRN3Q9UPQ7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.26■■■□□ 2.43
PDZRN3Q9UPQ7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PDZRN3Q9UPQ7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.25■■■□□ 2.43
PDZRN3Q9UPQ7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDZRN3Q9UPQ7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC30.25■■■□□ 2.43
PDZRN3Q9UPQ7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDZRN3Q9UPQ7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDZRN3Q9UPQ7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PDZRN3Q9UPQ7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
PDZRN3Q9UPQ7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PDZRN3Q9UPQ7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
PDZRN3Q9UPQ7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PDZRN3Q9UPQ7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
PDZRN3Q9UPQ7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
PDZRN3Q9UPQ7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
PDZRN3Q9UPQ7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PDZRN3Q9UPQ7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PDZRN3Q9UPQ7 AC021242.3-201ENST00000607598 1377 ntBASIC30.23■■■□□ 2.43
PDZRN3Q9UPQ7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
PDZRN3Q9UPQ7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PDZRN3Q9UPQ7 AL139246.5-201ENST00000606645 996 ntBASIC30.22■■■□□ 2.43
PDZRN3Q9UPQ7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PDZRN3Q9UPQ7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
PDZRN3Q9UPQ7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
PDZRN3Q9UPQ7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
PDZRN3Q9UPQ7 AC096887.2-201ENST00000623443 1957 ntBASIC30.21■■■□□ 2.43
PDZRN3Q9UPQ7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PDZRN3Q9UPQ7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.21■■■□□ 2.43
PDZRN3Q9UPQ7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PDZRN3Q9UPQ7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.21■■■□□ 2.43
PDZRN3Q9UPQ7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.21■■■□□ 2.43
PDZRN3Q9UPQ7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.21■■■□□ 2.43
PDZRN3Q9UPQ7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
PDZRN3Q9UPQ7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PDZRN3Q9UPQ7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PDZRN3Q9UPQ7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC30.2■■■□□ 2.43
PDZRN3Q9UPQ7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PDZRN3Q9UPQ7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.2■■■□□ 2.43
PDZRN3Q9UPQ7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.2■■■□□ 2.43
PDZRN3Q9UPQ7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
PDZRN3Q9UPQ7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PDZRN3Q9UPQ7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PDZRN3Q9UPQ7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
PDZRN3Q9UPQ7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PDZRN3Q9UPQ7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
PDZRN3Q9UPQ7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
PDZRN3Q9UPQ7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PDZRN3Q9UPQ7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.17■■■□□ 2.42
PDZRN3Q9UPQ7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.17■■■□□ 2.42
PDZRN3Q9UPQ7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
PDZRN3Q9UPQ7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.16■■■□□ 2.42
PDZRN3Q9UPQ7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.16■■■□□ 2.42
PDZRN3Q9UPQ7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PDZRN3Q9UPQ7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PDZRN3Q9UPQ7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.16■■■□□ 2.42
PDZRN3Q9UPQ7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PDZRN3Q9UPQ7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.15■■■□□ 2.42
PDZRN3Q9UPQ7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PDZRN3Q9UPQ7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.14■■■□□ 2.42
PDZRN3Q9UPQ7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.14■■■□□ 2.42
PDZRN3Q9UPQ7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PDZRN3Q9UPQ7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.14■■■□□ 2.42
PDZRN3Q9UPQ7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PDZRN3Q9UPQ7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PDZRN3Q9UPQ7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PDZRN3Q9UPQ7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
PDZRN3Q9UPQ7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDZRN3Q9UPQ7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDZRN3Q9UPQ7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDZRN3Q9UPQ7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.13■■■□□ 2.41
PDZRN3Q9UPQ7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PDZRN3Q9UPQ7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.13■■■□□ 2.41
PDZRN3Q9UPQ7 AC120024.1-201ENST00000562672 995 ntBASIC30.13■■■□□ 2.41
PDZRN3Q9UPQ7 AC092028.1-203ENST00000608262 953 ntBASIC30.13■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 237.4 ms