Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
NPC1L1Q9UHC9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.95■■■□□ 2.71
NPC1L1Q9UHC9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NPC1L1Q9UHC9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
NPC1L1Q9UHC9 AL451085.2-201ENST00000605085 799 ntBASIC31.94■■■□□ 2.7
NPC1L1Q9UHC9 AL031848.2-201ENST00000607670 837 ntBASIC31.94■■■□□ 2.7
NPC1L1Q9UHC9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
NPC1L1Q9UHC9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.94■■■□□ 2.7
NPC1L1Q9UHC9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.94■■■□□ 2.7
NPC1L1Q9UHC9 MIR4281-201ENST00000580852 62 ntBASIC31.94■■■□□ 2.7
NPC1L1Q9UHC9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NPC1L1Q9UHC9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NPC1L1Q9UHC9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NPC1L1Q9UHC9 THA1P-201ENST00000590384 1145 ntBASIC31.93■■■□□ 2.7
NPC1L1Q9UHC9 AC022211.4-201ENST00000625094 2161 ntBASIC31.92■■■□□ 2.7
NPC1L1Q9UHC9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NPC1L1Q9UHC9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
NPC1L1Q9UHC9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
NPC1L1Q9UHC9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC31.91■■■□□ 2.7
NPC1L1Q9UHC9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NPC1L1Q9UHC9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NPC1L1Q9UHC9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NPC1L1Q9UHC9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NPC1L1Q9UHC9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.91■■■□□ 2.7
NPC1L1Q9UHC9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC31.9■■■□□ 2.7
NPC1L1Q9UHC9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.9■■■□□ 2.7
NPC1L1Q9UHC9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NPC1L1Q9UHC9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.9■■■□□ 2.7
NPC1L1Q9UHC9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NPC1L1Q9UHC9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.9■■■□□ 2.7
NPC1L1Q9UHC9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NPC1L1Q9UHC9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NPC1L1Q9UHC9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.9■■■□□ 2.7
NPC1L1Q9UHC9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NPC1L1Q9UHC9 AC142381.3-201ENST00000568208 1670 ntBASIC31.9■■■□□ 2.7
NPC1L1Q9UHC9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NPC1L1Q9UHC9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
NPC1L1Q9UHC9 GAK-223ENST00000628912 497 ntTSL 5 BASIC31.89■■■□□ 2.7
NPC1L1Q9UHC9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
NPC1L1Q9UHC9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NPC1L1Q9UHC9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.88■■■□□ 2.69
NPC1L1Q9UHC9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
NPC1L1Q9UHC9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
NPC1L1Q9UHC9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
NPC1L1Q9UHC9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NPC1L1Q9UHC9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
NPC1L1Q9UHC9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
NPC1L1Q9UHC9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC31.87■■■□□ 2.69
NPC1L1Q9UHC9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC31.87■■■□□ 2.69
NPC1L1Q9UHC9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NPC1L1Q9UHC9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NPC1L1Q9UHC9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.85■■■□□ 2.69
NPC1L1Q9UHC9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC31.85■■■□□ 2.69
NPC1L1Q9UHC9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NPC1L1Q9UHC9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NPC1L1Q9UHC9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
NPC1L1Q9UHC9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.85■■■□□ 2.69
NPC1L1Q9UHC9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NPC1L1Q9UHC9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NPC1L1Q9UHC9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NPC1L1Q9UHC9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NPC1L1Q9UHC9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
NPC1L1Q9UHC9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NPC1L1Q9UHC9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NPC1L1Q9UHC9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NPC1L1Q9UHC9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NPC1L1Q9UHC9 AC009299.2-201ENST00000482477 511 ntBASIC31.83■■■□□ 2.69
NPC1L1Q9UHC9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NPC1L1Q9UHC9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NPC1L1Q9UHC9 AC137630.3-201ENST00000607245 391 ntBASIC31.82■■■□□ 2.69
NPC1L1Q9UHC9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NPC1L1Q9UHC9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
NPC1L1Q9UHC9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC31.81■■■□□ 2.68
NPC1L1Q9UHC9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.81■■■□□ 2.68
NPC1L1Q9UHC9 AF131216.4-201ENST00000638924 1588 ntBASIC31.81■■■□□ 2.68
NPC1L1Q9UHC9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NPC1L1Q9UHC9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC31.81■■■□□ 2.68
NPC1L1Q9UHC9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NPC1L1Q9UHC9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NPC1L1Q9UHC9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
NPC1L1Q9UHC9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NPC1L1Q9UHC9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NPC1L1Q9UHC9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NPC1L1Q9UHC9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
NPC1L1Q9UHC9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.8■■■□□ 2.68
NPC1L1Q9UHC9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.79■■■□□ 2.68
NPC1L1Q9UHC9 AP003733.4-201ENST00000623785 1697 ntBASIC31.79■■■□□ 2.68
NPC1L1Q9UHC9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.79■■■□□ 2.68
NPC1L1Q9UHC9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
NPC1L1Q9UHC9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.78■■■□□ 2.68
NPC1L1Q9UHC9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NPC1L1Q9UHC9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.77■■■□□ 2.68
NPC1L1Q9UHC9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NPC1L1Q9UHC9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NPC1L1Q9UHC9 AC138932.3-201ENST00000567634 1902 ntBASIC31.77■■■□□ 2.68
NPC1L1Q9UHC9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NPC1L1Q9UHC9 AL035685.1-201ENST00000636663 812 ntBASIC31.77■■■□□ 2.68
NPC1L1Q9UHC9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NPC1L1Q9UHC9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NPC1L1Q9UHC9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.76■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms