Protein–RNA interactions for Protein: Q96FF7

MISP3, Uncharacterized protein MISP3, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MISP3Q96FF7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MISP3Q96FF7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MISP3Q96FF7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MISP3Q96FF7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MISP3Q96FF7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MISP3Q96FF7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.78■□□□□ 0.6
MISP3Q96FF7 AC092296.2-201ENST00000589470 999 ntBASIC18.78■□□□□ 0.6
MISP3Q96FF7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MISP3Q96FF7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MISP3Q96FF7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MISP3Q96FF7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MISP3Q96FF7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
MISP3Q96FF7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MISP3Q96FF7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.77■□□□□ 0.6
MISP3Q96FF7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MISP3Q96FF7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MISP3Q96FF7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MISP3Q96FF7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MISP3Q96FF7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
MISP3Q96FF7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MISP3Q96FF7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.77■□□□□ 0.6
MISP3Q96FF7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MISP3Q96FF7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MISP3Q96FF7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
MISP3Q96FF7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MISP3Q96FF7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
MISP3Q96FF7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.76■□□□□ 0.59
MISP3Q96FF7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MISP3Q96FF7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
MISP3Q96FF7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MISP3Q96FF7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MISP3Q96FF7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.76■□□□□ 0.59
MISP3Q96FF7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MISP3Q96FF7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MISP3Q96FF7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MISP3Q96FF7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MISP3Q96FF7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MISP3Q96FF7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
MISP3Q96FF7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MISP3Q96FF7 ECEL1P2-201ENST00000461596 1295 ntBASIC18.75■□□□□ 0.59
MISP3Q96FF7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.75■□□□□ 0.59
MISP3Q96FF7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MISP3Q96FF7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.75■□□□□ 0.59
MISP3Q96FF7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.75■□□□□ 0.59
MISP3Q96FF7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MISP3Q96FF7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MISP3Q96FF7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MISP3Q96FF7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MISP3Q96FF7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.74■□□□□ 0.59
MISP3Q96FF7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MISP3Q96FF7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.73■□□□□ 0.59
MISP3Q96FF7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MISP3Q96FF7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MISP3Q96FF7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.73■□□□□ 0.59
MISP3Q96FF7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MISP3Q96FF7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MISP3Q96FF7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MISP3Q96FF7 AL139125.2-201ENST00000623134 1869 ntBASIC18.73■□□□□ 0.59
MISP3Q96FF7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MISP3Q96FF7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.72■□□□□ 0.59
MISP3Q96FF7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
MISP3Q96FF7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MISP3Q96FF7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
MISP3Q96FF7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MISP3Q96FF7 RP9P-202ENST00000450133 1212 ntBASIC18.72■□□□□ 0.59
MISP3Q96FF7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
MISP3Q96FF7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MISP3Q96FF7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MISP3Q96FF7 SLC6A10P-202ENST00000431994 2058 ntBASIC18.72■□□□□ 0.59
MISP3Q96FF7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
MISP3Q96FF7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MISP3Q96FF7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MISP3Q96FF7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MISP3Q96FF7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MISP3Q96FF7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MISP3Q96FF7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.71■□□□□ 0.59
MISP3Q96FF7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MISP3Q96FF7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MISP3Q96FF7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MISP3Q96FF7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MISP3Q96FF7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MISP3Q96FF7 AC093536.1-201ENST00000569153 554 ntBASIC18.7■□□□□ 0.58
MISP3Q96FF7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.7■□□□□ 0.58
MISP3Q96FF7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MISP3Q96FF7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MISP3Q96FF7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MISP3Q96FF7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MISP3Q96FF7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MISP3Q96FF7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MISP3Q96FF7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.69■□□□□ 0.58
MISP3Q96FF7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.69■□□□□ 0.58
MISP3Q96FF7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.69■□□□□ 0.58
MISP3Q96FF7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MISP3Q96FF7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MISP3Q96FF7 AP003733.4-201ENST00000623785 1697 ntBASIC18.69■□□□□ 0.58
MISP3Q96FF7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MISP3Q96FF7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MISP3Q96FF7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MISP3Q96FF7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MISP3Q96FF7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms