Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TTC9CQ8N5M4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TTC9CQ8N5M4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TTC9CQ8N5M4 AL139125.2-201ENST00000623134 1869 ntBASIC18.48■□□□□ 0.55
TTC9CQ8N5M4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC9CQ8N5M4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC9CQ8N5M4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC9CQ8N5M4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.48■□□□□ 0.55
TTC9CQ8N5M4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC9CQ8N5M4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TTC9CQ8N5M4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 LONRF2P2-201ENST00000439212 571 ntBASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC9CQ8N5M4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 AL592295.1-201ENST00000400984 884 ntBASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC9CQ8N5M4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.45■□□□□ 0.54
TTC9CQ8N5M4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC9CQ8N5M4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC9CQ8N5M4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.45■□□□□ 0.54
TTC9CQ8N5M4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC9CQ8N5M4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TTC9CQ8N5M4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC9CQ8N5M4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.45■□□□□ 0.54
TTC9CQ8N5M4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 DUX4L18-201ENST00000553347 1267 ntBASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.44■□□□□ 0.54
TTC9CQ8N5M4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC9CQ8N5M4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC9CQ8N5M4 AC004987.1-201ENST00000428627 508 ntBASIC18.43■□□□□ 0.54
TTC9CQ8N5M4 ATP5G2P3-201ENST00000429083 425 ntBASIC18.43■□□□□ 0.54
TTC9CQ8N5M4 AC139795.1-202ENST00000500444 432 ntBASIC18.43■□□□□ 0.54
TTC9CQ8N5M4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TTC9CQ8N5M4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TTC9CQ8N5M4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TTC9CQ8N5M4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.43■□□□□ 0.54
TTC9CQ8N5M4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TTC9CQ8N5M4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TTC9CQ8N5M4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.42■□□□□ 0.54
TTC9CQ8N5M4 AC019171.1-201ENST00000601251 1056 ntBASIC18.42■□□□□ 0.54
TTC9CQ8N5M4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.42■□□□□ 0.54
TTC9CQ8N5M4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TTC9CQ8N5M4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.42■□□□□ 0.54
TTC9CQ8N5M4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.42■□□□□ 0.54
TTC9CQ8N5M4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC9CQ8N5M4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TTC9CQ8N5M4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TTC9CQ8N5M4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 TSPY13P-201ENST00000338964 914 ntBASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms