Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42P60953 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.38■■□□□ 1.01
CDC42P60953 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42P60953 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42P60953 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
CDC42P60953 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42P60953 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42P60953 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.37■■□□□ 1.01
CDC42P60953 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CDC42P60953 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.37■■□□□ 1.01
CDC42P60953 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDC42P60953 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42P60953 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.37■■□□□ 1.01
CDC42P60953 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.37■■□□□ 1.01
CDC42P60953 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.37■■□□□ 1.01
CDC42P60953 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42P60953 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42P60953 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42P60953 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42P60953 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42P60953 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.36■■□□□ 1.01
CDC42P60953 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDC42P60953 MIR6089-201ENST00000616698 64 ntBASIC21.36■■□□□ 1.01
CDC42P60953 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42P60953 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42P60953 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42P60953 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.35■■□□□ 1.01
CDC42P60953 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42P60953 ABCB10P4-201ENST00000566803 2184 ntBASIC21.35■■□□□ 1.01
CDC42P60953 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
CDC42P60953 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42P60953 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42P60953 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDC42P60953 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42P60953 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.33■■□□□ 1.01
CDC42P60953 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42P60953 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42P60953 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.33■■□□□ 1.01
CDC42P60953 DUX4L11-201ENST00000611504 1267 ntBASIC21.33■■□□□ 1.01
CDC42P60953 DUX4L12-201ENST00000614593 1267 ntBASIC21.33■■□□□ 1.01
CDC42P60953 DUX4L14-201ENST00000621227 1267 ntBASIC21.33■■□□□ 1.01
CDC42P60953 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.33■■□□□ 1.01
CDC42P60953 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42P60953 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42P60953 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDC42P60953 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42P60953 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDC42P60953 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CDC42P60953 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42P60953 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.32■■□□□ 1
CDC42P60953 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.32■■□□□ 1
CDC42P60953 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDC42P60953 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.32■■□□□ 1
CDC42P60953 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CDC42P60953 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42P60953 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42P60953 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.31■■□□□ 1
CDC42P60953 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42P60953 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.31■■□□□ 1
CDC42P60953 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDC42P60953 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
CDC42P60953 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.31■■□□□ 1
CDC42P60953 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDC42P60953 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42P60953 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.3■■□□□ 1
CDC42P60953 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CDC42P60953 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.3■■□□□ 1
CDC42P60953 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42P60953 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.29■■□□□ 1
CDC42P60953 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42P60953 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42P60953 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42P60953 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC42P60953 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.29■■□□□ 1
CDC42P60953 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.29■■□□□ 1
CDC42P60953 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42P60953 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.29■■□□□ 1
CDC42P60953 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42P60953 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42P60953 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42P60953 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDC42P60953 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42P60953 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42P60953 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC42P60953 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC42P60953 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.27■■□□□ 1
CDC42P60953 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.27■■□□□ 1
CDC42P60953 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDC42P60953 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42P60953 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42P60953 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42P60953 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC42P60953 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42P60953 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42P60953 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42P60953 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC42P60953 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42P60953 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42P60953 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42P60953 RPS2P35-201ENST00000443417 897 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms