Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCR9P51686 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR9P51686 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR9P51686 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCR9P51686 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.62■□□□□ 0.89
CCR9P51686 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.62■□□□□ 0.89
CCR9P51686 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCR9P51686 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCR9P51686 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.61■□□□□ 0.89
CCR9P51686 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCR9P51686 AC092296.2-201ENST00000589470 999 ntBASIC20.61■□□□□ 0.89
CCR9P51686 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCR9P51686 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.61■□□□□ 0.89
CCR9P51686 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCR9P51686 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.61■□□□□ 0.89
CCR9P51686 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCR9P51686 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.6■□□□□ 0.89
CCR9P51686 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.6■□□□□ 0.89
CCR9P51686 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCR9P51686 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCR9P51686 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCR9P51686 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.6■□□□□ 0.89
CCR9P51686 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCR9P51686 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.6■□□□□ 0.89
CCR9P51686 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCR9P51686 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCR9P51686 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.6■□□□□ 0.89
CCR9P51686 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCR9P51686 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.59■□□□□ 0.89
CCR9P51686 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.59■□□□□ 0.89
CCR9P51686 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.59■□□□□ 0.89
CCR9P51686 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCR9P51686 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCR9P51686 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCR9P51686 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCR9P51686 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCR9P51686 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.59■□□□□ 0.89
CCR9P51686 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCR9P51686 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCR9P51686 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCR9P51686 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCR9P51686 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCR9P51686 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.59■□□□□ 0.89
CCR9P51686 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCR9P51686 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.59■□□□□ 0.89
CCR9P51686 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCR9P51686 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCR9P51686 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.58■□□□□ 0.89
CCR9P51686 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCR9P51686 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCR9P51686 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCR9P51686 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCR9P51686 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.58■□□□□ 0.88
CCR9P51686 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCR9P51686 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.58■□□□□ 0.88
CCR9P51686 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CCR9P51686 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCR9P51686 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCR9P51686 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCR9P51686 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCR9P51686 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CCR9P51686 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.57■□□□□ 0.88
CCR9P51686 ECEL1P2-201ENST00000461596 1295 ntBASIC20.56■□□□□ 0.88
CCR9P51686 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCR9P51686 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCR9P51686 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCR9P51686 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCR9P51686 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCR9P51686 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR9P51686 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCR9P51686 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR9P51686 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CCR9P51686 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR9P51686 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR9P51686 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CCR9P51686 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR9P51686 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR9P51686 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCR9P51686 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCR9P51686 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCR9P51686 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCR9P51686 RP9P-202ENST00000450133 1212 ntBASIC20.54■□□□□ 0.88
CCR9P51686 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.54■□□□□ 0.88
CCR9P51686 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCR9P51686 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCR9P51686 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCR9P51686 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCR9P51686 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.53■□□□□ 0.88
CCR9P51686 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCR9P51686 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCR9P51686 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCR9P51686 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCR9P51686 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.53■□□□□ 0.88
CCR9P51686 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCR9P51686 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCR9P51686 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCR9P51686 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCR9P51686 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.52■□□□□ 0.88
CCR9P51686 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCR9P51686 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms