Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LCN1P31025 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCN1P31025 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCN1P31025 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LCN1P31025 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCN1P31025 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LCN1P31025 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCN1P31025 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.66■■□□□ 1.06
LCN1P31025 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LCN1P31025 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
LCN1P31025 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LCN1P31025 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LCN1P31025 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LCN1P31025 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LCN1P31025 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
LCN1P31025 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LCN1P31025 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LCN1P31025 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.64■■□□□ 1.05
LCN1P31025 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.64■■□□□ 1.05
LCN1P31025 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LCN1P31025 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LCN1P31025 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LCN1P31025 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.64■■□□□ 1.05
LCN1P31025 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.64■■□□□ 1.05
LCN1P31025 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LCN1P31025 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.63■■□□□ 1.05
LCN1P31025 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LCN1P31025 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
LCN1P31025 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LCN1P31025 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LCN1P31025 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.63■■□□□ 1.05
LCN1P31025 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LCN1P31025 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LCN1P31025 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.62■■□□□ 1.05
LCN1P31025 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.62■■□□□ 1.05
LCN1P31025 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.62■■□□□ 1.05
LCN1P31025 BHLHE23-202ENST00000612929 1109 ntBASIC21.62■■□□□ 1.05
LCN1P31025 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.62■■□□□ 1.05
LCN1P31025 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LCN1P31025 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LCN1P31025 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LCN1P31025 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.62■■□□□ 1.05
LCN1P31025 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LCN1P31025 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.62■■□□□ 1.05
LCN1P31025 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCN1P31025 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCN1P31025 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.61■■□□□ 1.05
LCN1P31025 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.61■■□□□ 1.05
LCN1P31025 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCN1P31025 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LCN1P31025 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LCN1P31025 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.61■■□□□ 1.05
LCN1P31025 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.61■■□□□ 1.05
LCN1P31025 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.61■■□□□ 1.05
LCN1P31025 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LCN1P31025 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
LCN1P31025 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCN1P31025 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCN1P31025 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCN1P31025 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCN1P31025 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LCN1P31025 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCN1P31025 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LCN1P31025 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCN1P31025 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.6■■□□□ 1.05
LCN1P31025 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCN1P31025 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LCN1P31025 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LCN1P31025 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
LCN1P31025 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
LCN1P31025 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LCN1P31025 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
LCN1P31025 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LCN1P31025 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.59■■□□□ 1.05
LCN1P31025 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.59■■□□□ 1.05
LCN1P31025 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LCN1P31025 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.59■■□□□ 1.05
LCN1P31025 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LCN1P31025 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LCN1P31025 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.58■■□□□ 1.04
LCN1P31025 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.58■■□□□ 1.04
LCN1P31025 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LCN1P31025 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.57■■□□□ 1.04
LCN1P31025 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LCN1P31025 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LCN1P31025 AC138932.3-201ENST00000567634 1902 ntBASIC21.57■■□□□ 1.04
LCN1P31025 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.57■■□□□ 1.04
LCN1P31025 AC011551.1-201ENST00000614101 683 ntBASIC21.57■■□□□ 1.04
LCN1P31025 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LCN1P31025 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LCN1P31025 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.57■■□□□ 1.04
LCN1P31025 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LCN1P31025 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LCN1P31025 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LCN1P31025 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LCN1P31025 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.56■■□□□ 1.04
LCN1P31025 AL033527.3-201ENST00000566366 1196 ntBASIC21.56■■□□□ 1.04
LCN1P31025 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.56■■□□□ 1.04
LCN1P31025 AC093323.1-202ENST00000635031 2045 ntBASIC21.56■■□□□ 1.04
LCN1P31025 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms