Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.17■■■□□ 2.74
PCDHA11Q9Y5I1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.17■■■□□ 2.74
PCDHA11Q9Y5I1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PCDHA11Q9Y5I1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.15■■■□□ 2.74
PCDHA11Q9Y5I1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
PCDHA11Q9Y5I1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
PCDHA11Q9Y5I1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.05■■■□□ 2.72
PCDHA11Q9Y5I1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.04■■■□□ 2.72
PCDHA11Q9Y5I1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.03■■■□□ 2.72
PCDHA11Q9Y5I1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PCDHA11Q9Y5I1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.01■■■□□ 2.72
PCDHA11Q9Y5I1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
PCDHA11Q9Y5I1 RARRES2P7-201ENST00000567349 469 ntBASIC32.01■■■□□ 2.71
PCDHA11Q9Y5I1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.96■■■□□ 2.71
PCDHA11Q9Y5I1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.96■■■□□ 2.71
PCDHA11Q9Y5I1 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
PCDHA11Q9Y5I1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PCDHA11Q9Y5I1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCDHA11Q9Y5I1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCDHA11Q9Y5I1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.69
PCDHA11Q9Y5I1 AC097358.2-201ENST00000607541 1159 ntBASIC31.81■■■□□ 2.68
PCDHA11Q9Y5I1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
PCDHA11Q9Y5I1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PCDHA11Q9Y5I1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PCDHA11Q9Y5I1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.73■■■□□ 2.67
PCDHA11Q9Y5I1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
PCDHA11Q9Y5I1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.68■■■□□ 2.66
PCDHA11Q9Y5I1 AC136428.2-201ENST00000563187 214 ntBASIC31.67■■■□□ 2.66
PCDHA11Q9Y5I1 SETD8P1-201ENST00000623146 1180 ntBASIC31.64■■■□□ 2.66
PCDHA11Q9Y5I1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
PCDHA11Q9Y5I1 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.63■■■□□ 2.65
PCDHA11Q9Y5I1 RPS2P35-201ENST00000443417 897 ntBASIC31.63■■■□□ 2.65
PCDHA11Q9Y5I1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.61■■■□□ 2.65
PCDHA11Q9Y5I1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.6■■■□□ 2.65
PCDHA11Q9Y5I1 SUZ12P1-203ENST00000578195 985 ntBASIC31.6■■■□□ 2.65
PCDHA11Q9Y5I1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PCDHA11Q9Y5I1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.59■■■□□ 2.65
PCDHA11Q9Y5I1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PCDHA11Q9Y5I1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
PCDHA11Q9Y5I1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PCDHA11Q9Y5I1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.56■■■□□ 2.64
PCDHA11Q9Y5I1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PCDHA11Q9Y5I1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.49■■■□□ 2.63
PCDHA11Q9Y5I1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.47■■■□□ 2.63
PCDHA11Q9Y5I1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.45■■■□□ 2.63
PCDHA11Q9Y5I1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
PCDHA11Q9Y5I1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
PCDHA11Q9Y5I1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PCDHA11Q9Y5I1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PCDHA11Q9Y5I1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.41■■■□□ 2.62
PCDHA11Q9Y5I1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCDHA11Q9Y5I1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
PCDHA11Q9Y5I1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.4■■■□□ 2.62
PCDHA11Q9Y5I1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.38■■■□□ 2.61
PCDHA11Q9Y5I1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PCDHA11Q9Y5I1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PCDHA11Q9Y5I1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
PCDHA11Q9Y5I1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.35■■■□□ 2.61
PCDHA11Q9Y5I1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHA11Q9Y5I1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.31■■■□□ 2.6
PCDHA11Q9Y5I1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PCDHA11Q9Y5I1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
PCDHA11Q9Y5I1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
PCDHA11Q9Y5I1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PCDHA11Q9Y5I1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.27■■■□□ 2.6
PCDHA11Q9Y5I1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PCDHA11Q9Y5I1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.24■■■□□ 2.59
PCDHA11Q9Y5I1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCDHA11Q9Y5I1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PCDHA11Q9Y5I1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
PCDHA11Q9Y5I1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
PCDHA11Q9Y5I1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PCDHA11Q9Y5I1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PCDHA11Q9Y5I1 AL162393.1-201ENST00000437852 946 ntBASIC31.08■■■□□ 2.57
PCDHA11Q9Y5I1 CAHM-201ENST00000604200 896 ntBASIC31.05■■■□□ 2.56
PCDHA11Q9Y5I1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PCDHA11Q9Y5I1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.04■■■□□ 2.56
PCDHA11Q9Y5I1 AP006261.1-201ENST00000584783 668 ntBASIC31.04■■■□□ 2.56
PCDHA11Q9Y5I1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PCDHA11Q9Y5I1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.03■■■□□ 2.56
PCDHA11Q9Y5I1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
PCDHA11Q9Y5I1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PCDHA11Q9Y5I1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PCDHA11Q9Y5I1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31■■■□□ 2.55
PCDHA11Q9Y5I1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
PCDHA11Q9Y5I1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.96■■■□□ 2.55
PCDHA11Q9Y5I1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.96■■■□□ 2.55
PCDHA11Q9Y5I1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PCDHA11Q9Y5I1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PCDHA11Q9Y5I1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PCDHA11Q9Y5I1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.91■■■□□ 2.54
PCDHA11Q9Y5I1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
PCDHA11Q9Y5I1 AL391121.1-201ENST00000607967 1349 ntBASIC30.87■■■□□ 2.53
PCDHA11Q9Y5I1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PCDHA11Q9Y5I1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PCDHA11Q9Y5I1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PCDHA11Q9Y5I1 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.85■■■□□ 2.53
PCDHA11Q9Y5I1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.84■■■□□ 2.53
PCDHA11Q9Y5I1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PCDHA11Q9Y5I1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms