Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGA9Q9Y5G4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGA9Q9Y5G4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGA9Q9Y5G4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHGA9Q9Y5G4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
PCDHGA9Q9Y5G4 AL031258.1-201ENST00000623562 325 ntBASIC27.16■■□□□ 1.94
PCDHGA9Q9Y5G4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
PCDHGA9Q9Y5G4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
PCDHGA9Q9Y5G4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.11■■□□□ 1.93
PCDHGA9Q9Y5G4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHGA9Q9Y5G4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHGA9Q9Y5G4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGA9Q9Y5G4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.04■■□□□ 1.92
PCDHGA9Q9Y5G4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.04■■□□□ 1.92
PCDHGA9Q9Y5G4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHGA9Q9Y5G4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHGA9Q9Y5G4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHGA9Q9Y5G4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27■■□□□ 1.91
PCDHGA9Q9Y5G4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27■■□□□ 1.91
PCDHGA9Q9Y5G4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
PCDHGA9Q9Y5G4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.99■■□□□ 1.91
PCDHGA9Q9Y5G4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHGA9Q9Y5G4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.86■■□□□ 1.89
PCDHGA9Q9Y5G4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHGA9Q9Y5G4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.84■■□□□ 1.89
PCDHGA9Q9Y5G4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.84■■□□□ 1.89
PCDHGA9Q9Y5G4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
PCDHGA9Q9Y5G4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.82■■□□□ 1.88
PCDHGA9Q9Y5G4 RARRES2P7-201ENST00000567349 469 ntBASIC26.82■■□□□ 1.88
PCDHGA9Q9Y5G4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDHGA9Q9Y5G4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
PCDHGA9Q9Y5G4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHGA9Q9Y5G4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHGA9Q9Y5G4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDHGA9Q9Y5G4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.73■■□□□ 1.87
PCDHGA9Q9Y5G4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHGA9Q9Y5G4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
PCDHGA9Q9Y5G4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHGA9Q9Y5G4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.69■■□□□ 1.86
PCDHGA9Q9Y5G4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHGA9Q9Y5G4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHGA9Q9Y5G4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDHGA9Q9Y5G4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDHGA9Q9Y5G4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.66■■□□□ 1.86
PCDHGA9Q9Y5G4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGA9Q9Y5G4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGA9Q9Y5G4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.63■■□□□ 1.85
PCDHGA9Q9Y5G4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGA9Q9Y5G4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHGA9Q9Y5G4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHGA9Q9Y5G4 AC097358.2-201ENST00000607541 1159 ntBASIC26.61■■□□□ 1.85
PCDHGA9Q9Y5G4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGA9Q9Y5G4 SETD8P1-201ENST00000623146 1180 ntBASIC26.56■■□□□ 1.84
PCDHGA9Q9Y5G4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.55■■□□□ 1.84
PCDHGA9Q9Y5G4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.53■■□□□ 1.84
PCDHGA9Q9Y5G4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHGA9Q9Y5G4 AC136428.2-201ENST00000563187 214 ntBASIC26.52■■□□□ 1.84
PCDHGA9Q9Y5G4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGA9Q9Y5G4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGA9Q9Y5G4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
PCDHGA9Q9Y5G4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHGA9Q9Y5G4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.45■■□□□ 1.82
PCDHGA9Q9Y5G4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGA9Q9Y5G4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.43■■□□□ 1.82
PCDHGA9Q9Y5G4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.41■■□□□ 1.82
PCDHGA9Q9Y5G4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHGA9Q9Y5G4 SUZ12P1-203ENST00000578195 985 ntBASIC26.4■■□□□ 1.82
PCDHGA9Q9Y5G4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHGA9Q9Y5G4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGA9Q9Y5G4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGA9Q9Y5G4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHGA9Q9Y5G4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHGA9Q9Y5G4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA9Q9Y5G4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA9Q9Y5G4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHGA9Q9Y5G4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHGA9Q9Y5G4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGA9Q9Y5G4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDHGA9Q9Y5G4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDHGA9Q9Y5G4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA9Q9Y5G4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA9Q9Y5G4 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.29■■□□□ 1.8
PCDHGA9Q9Y5G4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.29■■□□□ 1.8
PCDHGA9Q9Y5G4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.28■■□□□ 1.8
PCDHGA9Q9Y5G4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
PCDHGA9Q9Y5G4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGA9Q9Y5G4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGA9Q9Y5G4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGA9Q9Y5G4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGA9Q9Y5G4 RPS2P35-201ENST00000443417 897 ntBASIC26.24■■□□□ 1.79
PCDHGA9Q9Y5G4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGA9Q9Y5G4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGA9Q9Y5G4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
PCDHGA9Q9Y5G4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGA9Q9Y5G4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
PCDHGA9Q9Y5G4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGA9Q9Y5G4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGA9Q9Y5G4 AC145285.7-201ENST00000614819 1539 ntBASIC26.14■■□□□ 1.78
PCDHGA9Q9Y5G4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA9Q9Y5G4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms