Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
NCDNQ9UBB6 RARRES2P7-201ENST00000567349 469 ntBASIC29.67■■■□□ 2.34
NCDNQ9UBB6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.66■■■□□ 2.34
NCDNQ9UBB6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NCDNQ9UBB6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
NCDNQ9UBB6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
NCDNQ9UBB6 RPS2P35-201ENST00000443417 897 ntBASIC29.47■■■□□ 2.31
NCDNQ9UBB6 AC097358.2-201ENST00000607541 1159 ntBASIC29.47■■■□□ 2.31
NCDNQ9UBB6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.45■■■□□ 2.31
NCDNQ9UBB6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
NCDNQ9UBB6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
NCDNQ9UBB6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NCDNQ9UBB6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.37■■■□□ 2.29
NCDNQ9UBB6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
NCDNQ9UBB6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.33■■■□□ 2.29
NCDNQ9UBB6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
NCDNQ9UBB6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
NCDNQ9UBB6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.28■■■□□ 2.28
NCDNQ9UBB6 SETD8P1-201ENST00000623146 1180 ntBASIC29.26■■■□□ 2.27
NCDNQ9UBB6 AC136428.2-201ENST00000563187 214 ntBASIC29.24■■■□□ 2.27
NCDNQ9UBB6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
NCDNQ9UBB6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
NCDNQ9UBB6 SUZ12P1-203ENST00000578195 985 ntBASIC29.22■■■□□ 2.27
NCDNQ9UBB6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.2■■■□□ 2.27
NCDNQ9UBB6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
NCDNQ9UBB6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
NCDNQ9UBB6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
NCDNQ9UBB6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.14■■■□□ 2.26
NCDNQ9UBB6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
NCDNQ9UBB6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
NCDNQ9UBB6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
NCDNQ9UBB6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.07■■■□□ 2.24
NCDNQ9UBB6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
NCDNQ9UBB6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.05■■■□□ 2.24
NCDNQ9UBB6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
NCDNQ9UBB6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.02■■■□□ 2.24
NCDNQ9UBB6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
NCDNQ9UBB6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
NCDNQ9UBB6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
NCDNQ9UBB6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.99■■■□□ 2.23
NCDNQ9UBB6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.97■■■□□ 2.23
NCDNQ9UBB6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
NCDNQ9UBB6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
NCDNQ9UBB6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.95■■■□□ 2.22
NCDNQ9UBB6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
NCDNQ9UBB6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.93■■■□□ 2.22
NCDNQ9UBB6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.92■■■□□ 2.22
NCDNQ9UBB6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
NCDNQ9UBB6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
NCDNQ9UBB6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
NCDNQ9UBB6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.84■■■□□ 2.21
NCDNQ9UBB6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
NCDNQ9UBB6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.83■■■□□ 2.21
NCDNQ9UBB6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
NCDNQ9UBB6 AL162393.1-201ENST00000437852 946 ntBASIC28.81■■■□□ 2.2
NCDNQ9UBB6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.73■■■□□ 2.19
NCDNQ9UBB6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.73■■■□□ 2.19
NCDNQ9UBB6 AP006261.1-201ENST00000584783 668 ntBASIC28.73■■■□□ 2.19
NCDNQ9UBB6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
NCDNQ9UBB6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
NCDNQ9UBB6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.69■■■□□ 2.18
NCDNQ9UBB6 MIR7108-201ENST00000614319 87 ntBASIC28.69■■■□□ 2.18
NCDNQ9UBB6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
NCDNQ9UBB6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
NCDNQ9UBB6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
NCDNQ9UBB6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.66■■■□□ 2.18
NCDNQ9UBB6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.64■■■□□ 2.18
NCDNQ9UBB6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCDNQ9UBB6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.64■■■□□ 2.18
NCDNQ9UBB6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
NCDNQ9UBB6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
NCDNQ9UBB6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.6■■■□□ 2.17
NCDNQ9UBB6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
NCDNQ9UBB6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
NCDNQ9UBB6 CAHM-201ENST00000604200 896 ntBASIC28.58■■■□□ 2.17
NCDNQ9UBB6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
NCDNQ9UBB6 ABHD17AP4-201ENST00000411545 909 ntBASIC28.57■■■□□ 2.16
NCDNQ9UBB6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
NCDNQ9UBB6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.56■■■□□ 2.16
NCDNQ9UBB6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.55■■■□□ 2.16
NCDNQ9UBB6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.5■■■□□ 2.15
NCDNQ9UBB6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
NCDNQ9UBB6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.49■■■□□ 2.15
NCDNQ9UBB6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
NCDNQ9UBB6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NCDNQ9UBB6 HLA-V-202ENST00000446817 847 ntBASIC28.48■■■□□ 2.15
NCDNQ9UBB6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
NCDNQ9UBB6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.47■■■□□ 2.15
NCDNQ9UBB6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
NCDNQ9UBB6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
NCDNQ9UBB6 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.44■■■□□ 2.14
NCDNQ9UBB6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.43■■■□□ 2.14
NCDNQ9UBB6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.43■■■□□ 2.14
NCDNQ9UBB6 AL391121.1-201ENST00000607967 1349 ntBASIC28.43■■■□□ 2.14
NCDNQ9UBB6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NCDNQ9UBB6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
NCDNQ9UBB6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
NCDNQ9UBB6 MIR3665-201ENST00000578708 105 ntBASIC28.36■■■□□ 2.13
NCDNQ9UBB6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
NCDNQ9UBB6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms