Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
ZNF407Q9C0G0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF407Q9C0G0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF407Q9C0G0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF407Q9C0G0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.29■■□□□ 1.8
ZNF407Q9C0G0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ZNF407Q9C0G0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ZNF407Q9C0G0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.2■■□□□ 1.79
ZNF407Q9C0G0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.18■■□□□ 1.78
ZNF407Q9C0G0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZNF407Q9C0G0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
ZNF407Q9C0G0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
ZNF407Q9C0G0 AL031258.1-201ENST00000623562 325 ntBASIC26.06■■□□□ 1.76
ZNF407Q9C0G0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
ZNF407Q9C0G0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZNF407Q9C0G0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZNF407Q9C0G0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.05■■□□□ 1.76
ZNF407Q9C0G0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.04■■□□□ 1.76
ZNF407Q9C0G0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
ZNF407Q9C0G0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ZNF407Q9C0G0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
ZNF407Q9C0G0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.03■■□□□ 1.76
ZNF407Q9C0G0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.03■■□□□ 1.76
ZNF407Q9C0G0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZNF407Q9C0G0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.01■■□□□ 1.75
ZNF407Q9C0G0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZNF407Q9C0G0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
ZNF407Q9C0G0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.98■■□□□ 1.75
ZNF407Q9C0G0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ZNF407Q9C0G0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ZNF407Q9C0G0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.92■■□□□ 1.74
ZNF407Q9C0G0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.92■■□□□ 1.74
ZNF407Q9C0G0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.92■■□□□ 1.74
ZNF407Q9C0G0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZNF407Q9C0G0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ZNF407Q9C0G0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ZNF407Q9C0G0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.88■■□□□ 1.73
ZNF407Q9C0G0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.87■■□□□ 1.73
ZNF407Q9C0G0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ZNF407Q9C0G0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.86■■□□□ 1.73
ZNF407Q9C0G0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.85■■□□□ 1.73
ZNF407Q9C0G0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ZNF407Q9C0G0 RARRES2P7-201ENST00000567349 469 ntBASIC25.84■■□□□ 1.73
ZNF407Q9C0G0 AC145285.7-201ENST00000614819 1539 ntBASIC25.83■■□□□ 1.73
ZNF407Q9C0G0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
ZNF407Q9C0G0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF407Q9C0G0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZNF407Q9C0G0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
ZNF407Q9C0G0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.75■■□□□ 1.71
ZNF407Q9C0G0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.75■■□□□ 1.71
ZNF407Q9C0G0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
ZNF407Q9C0G0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ZNF407Q9C0G0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.72■■□□□ 1.71
ZNF407Q9C0G0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ZNF407Q9C0G0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ZNF407Q9C0G0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
ZNF407Q9C0G0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.65■■□□□ 1.7
ZNF407Q9C0G0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.64■■□□□ 1.69
ZNF407Q9C0G0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
ZNF407Q9C0G0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
ZNF407Q9C0G0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.62■■□□□ 1.69
ZNF407Q9C0G0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
ZNF407Q9C0G0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZNF407Q9C0G0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.59■■□□□ 1.69
ZNF407Q9C0G0 AC136428.2-201ENST00000563187 214 ntBASIC25.58■■□□□ 1.69
ZNF407Q9C0G0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.57■■□□□ 1.68
ZNF407Q9C0G0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF407Q9C0G0 SETD8P1-201ENST00000623146 1180 ntBASIC25.56■■□□□ 1.68
ZNF407Q9C0G0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.55■■□□□ 1.68
ZNF407Q9C0G0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF407Q9C0G0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF407Q9C0G0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF407Q9C0G0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF407Q9C0G0 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.54■■□□□ 1.68
ZNF407Q9C0G0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
ZNF407Q9C0G0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.52■■□□□ 1.68
ZNF407Q9C0G0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.52■■□□□ 1.68
ZNF407Q9C0G0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ZNF407Q9C0G0 AC097358.2-201ENST00000607541 1159 ntBASIC25.5■■□□□ 1.67
ZNF407Q9C0G0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.49■■□□□ 1.67
ZNF407Q9C0G0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.49■■□□□ 1.67
ZNF407Q9C0G0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ZNF407Q9C0G0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZNF407Q9C0G0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.46■■□□□ 1.67
ZNF407Q9C0G0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZNF407Q9C0G0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
ZNF407Q9C0G0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZNF407Q9C0G0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.4■■□□□ 1.66
ZNF407Q9C0G0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ZNF407Q9C0G0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.39■■□□□ 1.66
ZNF407Q9C0G0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.37■■□□□ 1.65
ZNF407Q9C0G0 SUZ12P1-203ENST00000578195 985 ntBASIC25.37■■□□□ 1.65
ZNF407Q9C0G0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ZNF407Q9C0G0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.35■■□□□ 1.65
ZNF407Q9C0G0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ZNF407Q9C0G0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.33■■□□□ 1.65
ZNF407Q9C0G0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.32■■□□□ 1.64
ZNF407Q9C0G0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.32■■□□□ 1.64
ZNF407Q9C0G0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ZNF407Q9C0G0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms