Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
UBE2OQ9C0C9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.87■■■□□ 2.85
UBE2OQ9C0C9 RARRES2P7-201ENST00000567349 469 ntBASIC32.84■■■□□ 2.85
UBE2OQ9C0C9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
UBE2OQ9C0C9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
UBE2OQ9C0C9 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
UBE2OQ9C0C9 RPS2P35-201ENST00000443417 897 ntBASIC32.72■■■□□ 2.83
UBE2OQ9C0C9 AC097358.2-201ENST00000607541 1159 ntBASIC32.65■■■□□ 2.82
UBE2OQ9C0C9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
UBE2OQ9C0C9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
UBE2OQ9C0C9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
UBE2OQ9C0C9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.51■■■□□ 2.8
UBE2OQ9C0C9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
UBE2OQ9C0C9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
UBE2OQ9C0C9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.46■■■□□ 2.79
UBE2OQ9C0C9 AC136428.2-201ENST00000563187 214 ntBASIC32.44■■■□□ 2.78
UBE2OQ9C0C9 SUZ12P1-203ENST00000578195 985 ntBASIC32.43■■■□□ 2.78
UBE2OQ9C0C9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
UBE2OQ9C0C9 SETD8P1-201ENST00000623146 1180 ntBASIC32.39■■■□□ 2.78
UBE2OQ9C0C9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
UBE2OQ9C0C9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
UBE2OQ9C0C9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.36■■■□□ 2.77
UBE2OQ9C0C9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
UBE2OQ9C0C9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
UBE2OQ9C0C9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
UBE2OQ9C0C9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
UBE2OQ9C0C9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.26■■■□□ 2.76
UBE2OQ9C0C9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.75
UBE2OQ9C0C9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.24■■■□□ 2.75
UBE2OQ9C0C9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.22■■■□□ 2.75
UBE2OQ9C0C9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
UBE2OQ9C0C9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.18■■■□□ 2.74
UBE2OQ9C0C9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
UBE2OQ9C0C9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.17■■■□□ 2.74
UBE2OQ9C0C9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
UBE2OQ9C0C9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.14■■■□□ 2.73
UBE2OQ9C0C9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.13■■■□□ 2.73
UBE2OQ9C0C9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
UBE2OQ9C0C9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.12■■■□□ 2.73
UBE2OQ9C0C9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
UBE2OQ9C0C9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
UBE2OQ9C0C9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
UBE2OQ9C0C9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.05■■■□□ 2.72
UBE2OQ9C0C9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.04■■■□□ 2.72
UBE2OQ9C0C9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.04■■■□□ 2.72
UBE2OQ9C0C9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
UBE2OQ9C0C9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.03■■■□□ 2.72
UBE2OQ9C0C9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
UBE2OQ9C0C9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.97■■■□□ 2.71
UBE2OQ9C0C9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
UBE2OQ9C0C9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
UBE2OQ9C0C9 AL162393.1-201ENST00000437852 946 ntBASIC31.93■■■□□ 2.7
UBE2OQ9C0C9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.92■■■□□ 2.7
UBE2OQ9C0C9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.91■■■□□ 2.7
UBE2OQ9C0C9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.91■■■□□ 2.7
UBE2OQ9C0C9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.9■■■□□ 2.7
UBE2OQ9C0C9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.69
UBE2OQ9C0C9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.87■■■□□ 2.69
UBE2OQ9C0C9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
UBE2OQ9C0C9 MIR7108-201ENST00000614319 87 ntBASIC31.82■■■□□ 2.68
UBE2OQ9C0C9 AP006261.1-201ENST00000584783 668 ntBASIC31.81■■■□□ 2.68
UBE2OQ9C0C9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.8■■■□□ 2.68
UBE2OQ9C0C9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
UBE2OQ9C0C9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.78■■■□□ 2.68
UBE2OQ9C0C9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
UBE2OQ9C0C9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.74■■■□□ 2.67
UBE2OQ9C0C9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
UBE2OQ9C0C9 CAHM-201ENST00000604200 896 ntBASIC31.71■■■□□ 2.67
UBE2OQ9C0C9 ABHD17AP4-201ENST00000411545 909 ntBASIC31.7■■■□□ 2.67
UBE2OQ9C0C9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
UBE2OQ9C0C9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
UBE2OQ9C0C9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.68■■■□□ 2.66
UBE2OQ9C0C9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
UBE2OQ9C0C9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
UBE2OQ9C0C9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.67■■■□□ 2.66
UBE2OQ9C0C9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.66■■■□□ 2.66
UBE2OQ9C0C9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
UBE2OQ9C0C9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
UBE2OQ9C0C9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
UBE2OQ9C0C9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
UBE2OQ9C0C9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
UBE2OQ9C0C9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.62■■■□□ 2.65
UBE2OQ9C0C9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.61■■■□□ 2.65
UBE2OQ9C0C9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.61■■■□□ 2.65
UBE2OQ9C0C9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
UBE2OQ9C0C9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
UBE2OQ9C0C9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
UBE2OQ9C0C9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.56■■■□□ 2.64
UBE2OQ9C0C9 HLA-V-202ENST00000446817 847 ntBASIC31.56■■■□□ 2.64
UBE2OQ9C0C9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
UBE2OQ9C0C9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
UBE2OQ9C0C9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
UBE2OQ9C0C9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.54■■■□□ 2.64
UBE2OQ9C0C9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
UBE2OQ9C0C9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
UBE2OQ9C0C9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.52■■■□□ 2.64
UBE2OQ9C0C9 AL391121.1-201ENST00000607967 1349 ntBASIC31.48■■■□□ 2.63
UBE2OQ9C0C9 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.47■■■□□ 2.63
UBE2OQ9C0C9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
UBE2OQ9C0C9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms