Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.47■■■□□ 2.47
ZSWIM3Q96MP5 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
ZSWIM3Q96MP5 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ZSWIM3Q96MP5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
ZSWIM3Q96MP5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.41■■■□□ 2.46
ZSWIM3Q96MP5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.37■■■□□ 2.45
ZSWIM3Q96MP5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.37■■■□□ 2.45
ZSWIM3Q96MP5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ZSWIM3Q96MP5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ZSWIM3Q96MP5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
ZSWIM3Q96MP5 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ZSWIM3Q96MP5 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
ZSWIM3Q96MP5 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.29■■■□□ 2.44
ZSWIM3Q96MP5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
ZSWIM3Q96MP5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ZSWIM3Q96MP5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.23■■■□□ 2.43
ZSWIM3Q96MP5 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.22■■■□□ 2.43
ZSWIM3Q96MP5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.21■■■□□ 2.43
ZSWIM3Q96MP5 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
ZSWIM3Q96MP5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.2■■■□□ 2.43
ZSWIM3Q96MP5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.19■■■□□ 2.42
ZSWIM3Q96MP5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
ZSWIM3Q96MP5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.12■■■□□ 2.41
ZSWIM3Q96MP5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
ZSWIM3Q96MP5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ZSWIM3Q96MP5 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
ZSWIM3Q96MP5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ZSWIM3Q96MP5 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ZSWIM3Q96MP5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.08■■■□□ 2.41
ZSWIM3Q96MP5 RARRES2P7-201ENST00000567349 469 ntBASIC30.07■■■□□ 2.4
ZSWIM3Q96MP5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
ZSWIM3Q96MP5 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.04■■■□□ 2.4
ZSWIM3Q96MP5 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
ZSWIM3Q96MP5 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.02■■■□□ 2.4
ZSWIM3Q96MP5 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.98■■■□□ 2.39
ZSWIM3Q96MP5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.98■■■□□ 2.39
ZSWIM3Q96MP5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
ZSWIM3Q96MP5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.95■■■□□ 2.39
ZSWIM3Q96MP5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.91■■■□□ 2.38
ZSWIM3Q96MP5 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
ZSWIM3Q96MP5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.89■■■□□ 2.38
ZSWIM3Q96MP5 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
ZSWIM3Q96MP5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
ZSWIM3Q96MP5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.86■■■□□ 2.37
ZSWIM3Q96MP5 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
ZSWIM3Q96MP5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.85■■■□□ 2.37
ZSWIM3Q96MP5 AC097358.2-201ENST00000607541 1159 ntBASIC29.85■■■□□ 2.37
ZSWIM3Q96MP5 AC136428.2-201ENST00000563187 214 ntBASIC29.81■■■□□ 2.36
ZSWIM3Q96MP5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.81■■■□□ 2.36
ZSWIM3Q96MP5 SETD8P1-201ENST00000623146 1180 ntBASIC29.81■■■□□ 2.36
ZSWIM3Q96MP5 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ZSWIM3Q96MP5 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ZSWIM3Q96MP5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZSWIM3Q96MP5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.79■■■□□ 2.36
ZSWIM3Q96MP5 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.78■■■□□ 2.36
ZSWIM3Q96MP5 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.77■■■□□ 2.36
ZSWIM3Q96MP5 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
ZSWIM3Q96MP5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.76■■■□□ 2.35
ZSWIM3Q96MP5 AC145285.7-201ENST00000614819 1539 ntBASIC29.76■■■□□ 2.35
ZSWIM3Q96MP5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
ZSWIM3Q96MP5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.74■■■□□ 2.35
ZSWIM3Q96MP5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
ZSWIM3Q96MP5 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ZSWIM3Q96MP5 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.64■■■□□ 2.34
ZSWIM3Q96MP5 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.64■■■□□ 2.34
ZSWIM3Q96MP5 SUZ12P1-203ENST00000578195 985 ntBASIC29.63■■■□□ 2.33
ZSWIM3Q96MP5 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.62■■■□□ 2.33
ZSWIM3Q96MP5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ZSWIM3Q96MP5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
ZSWIM3Q96MP5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.58■■■□□ 2.33
ZSWIM3Q96MP5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.56■■■□□ 2.32
ZSWIM3Q96MP5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ZSWIM3Q96MP5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ZSWIM3Q96MP5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.51■■■□□ 2.32
ZSWIM3Q96MP5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ZSWIM3Q96MP5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ZSWIM3Q96MP5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.51■■■□□ 2.31
ZSWIM3Q96MP5 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ZSWIM3Q96MP5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ZSWIM3Q96MP5 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ZSWIM3Q96MP5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.44■■■□□ 2.3
ZSWIM3Q96MP5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ZSWIM3Q96MP5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ZSWIM3Q96MP5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.41■■■□□ 2.3
ZSWIM3Q96MP5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
ZSWIM3Q96MP5 CAHM-201ENST00000604200 896 ntBASIC29.4■■■□□ 2.3
ZSWIM3Q96MP5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ZSWIM3Q96MP5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ZSWIM3Q96MP5 RPS2P35-201ENST00000443417 897 ntBASIC29.39■■■□□ 2.3
ZSWIM3Q96MP5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ZSWIM3Q96MP5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ZSWIM3Q96MP5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
ZSWIM3Q96MP5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.35■■■□□ 2.29
ZSWIM3Q96MP5 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.33■■■□□ 2.29
ZSWIM3Q96MP5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ZSWIM3Q96MP5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ZSWIM3Q96MP5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ZSWIM3Q96MP5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
ZSWIM3Q96MP5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
ZSWIM3Q96MP5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms