Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
EXD3Q8N9H8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.54■■■□□ 2
EXD3Q8N9H8 AL031258.1-201ENST00000623562 325 ntBASIC27.54■■■□□ 2
EXD3Q8N9H8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
EXD3Q8N9H8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.5■■□□□ 1.99
EXD3Q8N9H8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
EXD3Q8N9H8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
EXD3Q8N9H8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.47■■□□□ 1.99
EXD3Q8N9H8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
EXD3Q8N9H8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.46■■□□□ 1.99
EXD3Q8N9H8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.46■■□□□ 1.99
EXD3Q8N9H8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
EXD3Q8N9H8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
EXD3Q8N9H8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.42■■□□□ 1.98
EXD3Q8N9H8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.42■■□□□ 1.98
EXD3Q8N9H8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.39■■□□□ 1.98
EXD3Q8N9H8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.38■■□□□ 1.97
EXD3Q8N9H8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
EXD3Q8N9H8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
EXD3Q8N9H8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
EXD3Q8N9H8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.34■■□□□ 1.97
EXD3Q8N9H8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
EXD3Q8N9H8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
EXD3Q8N9H8 RARRES2P7-201ENST00000567349 469 ntBASIC27.32■■□□□ 1.96
EXD3Q8N9H8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.31■■□□□ 1.96
EXD3Q8N9H8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
EXD3Q8N9H8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.24■■□□□ 1.95
EXD3Q8N9H8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.23■■□□□ 1.95
EXD3Q8N9H8 AC097358.2-201ENST00000607541 1159 ntBASIC27.17■■□□□ 1.94
EXD3Q8N9H8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
EXD3Q8N9H8 RPS2P35-201ENST00000443417 897 ntBASIC27.13■■□□□ 1.93
EXD3Q8N9H8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
EXD3Q8N9H8 AC136428.2-201ENST00000563187 214 ntBASIC27.06■■□□□ 1.92
EXD3Q8N9H8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
EXD3Q8N9H8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.04■■□□□ 1.92
EXD3Q8N9H8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
EXD3Q8N9H8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
EXD3Q8N9H8 SUZ12P1-203ENST00000578195 985 ntBASIC27.02■■□□□ 1.92
EXD3Q8N9H8 SETD8P1-201ENST00000623146 1180 ntBASIC26.99■■□□□ 1.91
EXD3Q8N9H8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
EXD3Q8N9H8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.97■■□□□ 1.91
EXD3Q8N9H8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.96■■□□□ 1.91
EXD3Q8N9H8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
EXD3Q8N9H8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
EXD3Q8N9H8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
EXD3Q8N9H8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
EXD3Q8N9H8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
EXD3Q8N9H8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
EXD3Q8N9H8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
EXD3Q8N9H8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.92■■□□□ 1.9
EXD3Q8N9H8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
EXD3Q8N9H8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.89■■□□□ 1.9
EXD3Q8N9H8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
EXD3Q8N9H8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
EXD3Q8N9H8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
EXD3Q8N9H8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.86■■□□□ 1.89
EXD3Q8N9H8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.83■■□□□ 1.89
EXD3Q8N9H8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.82■■□□□ 1.88
EXD3Q8N9H8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.82■■□□□ 1.88
EXD3Q8N9H8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
EXD3Q8N9H8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
EXD3Q8N9H8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.78■■□□□ 1.88
EXD3Q8N9H8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
EXD3Q8N9H8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.75■■□□□ 1.87
EXD3Q8N9H8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.74■■□□□ 1.87
EXD3Q8N9H8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.74■■□□□ 1.87
EXD3Q8N9H8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
EXD3Q8N9H8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.71■■□□□ 1.87
EXD3Q8N9H8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
EXD3Q8N9H8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
EXD3Q8N9H8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
EXD3Q8N9H8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.65■■□□□ 1.86
EXD3Q8N9H8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
EXD3Q8N9H8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
EXD3Q8N9H8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.62■■□□□ 1.85
EXD3Q8N9H8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
EXD3Q8N9H8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.61■■□□□ 1.85
EXD3Q8N9H8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.6■■□□□ 1.85
EXD3Q8N9H8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
EXD3Q8N9H8 AL162393.1-201ENST00000437852 946 ntBASIC26.57■■□□□ 1.84
EXD3Q8N9H8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.55■■□□□ 1.84
EXD3Q8N9H8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
EXD3Q8N9H8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
EXD3Q8N9H8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
EXD3Q8N9H8 CAHM-201ENST00000604200 896 ntBASIC26.53■■□□□ 1.84
EXD3Q8N9H8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
EXD3Q8N9H8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.52■■□□□ 1.84
EXD3Q8N9H8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
EXD3Q8N9H8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
EXD3Q8N9H8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.49■■□□□ 1.83
EXD3Q8N9H8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
EXD3Q8N9H8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
EXD3Q8N9H8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
EXD3Q8N9H8 AP006261.1-201ENST00000584783 668 ntBASIC26.43■■□□□ 1.82
EXD3Q8N9H8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
EXD3Q8N9H8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
EXD3Q8N9H8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
EXD3Q8N9H8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
EXD3Q8N9H8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.38■■□□□ 1.81
EXD3Q8N9H8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms