Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.62■■■□□ 2.65
LRRC43Q8N309 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
LRRC43Q8N309 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
LRRC43Q8N309 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.52■■■□□ 2.64
LRRC43Q8N309 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
LRRC43Q8N309 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
LRRC43Q8N309 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
LRRC43Q8N309 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
LRRC43Q8N309 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.48■■■□□ 2.63
LRRC43Q8N309 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.48■■■□□ 2.63
LRRC43Q8N309 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.46■■■□□ 2.63
LRRC43Q8N309 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
LRRC43Q8N309 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LRRC43Q8N309 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.39■■■□□ 2.62
LRRC43Q8N309 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.36■■■□□ 2.61
LRRC43Q8N309 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LRRC43Q8N309 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LRRC43Q8N309 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LRRC43Q8N309 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
LRRC43Q8N309 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
LRRC43Q8N309 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
LRRC43Q8N309 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.26■■■□□ 2.59
LRRC43Q8N309 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LRRC43Q8N309 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.23■■■□□ 2.59
LRRC43Q8N309 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
LRRC43Q8N309 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.18■■■□□ 2.58
LRRC43Q8N309 RARRES2P7-201ENST00000567349 469 ntBASIC31.18■■■□□ 2.58
LRRC43Q8N309 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LRRC43Q8N309 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
LRRC43Q8N309 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.14■■■□□ 2.58
LRRC43Q8N309 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LRRC43Q8N309 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
LRRC43Q8N309 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.12■■■□□ 2.57
LRRC43Q8N309 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
LRRC43Q8N309 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.11■■■□□ 2.57
LRRC43Q8N309 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
LRRC43Q8N309 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.08■■■□□ 2.57
LRRC43Q8N309 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.06■■■□□ 2.56
LRRC43Q8N309 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.06■■■□□ 2.56
LRRC43Q8N309 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.04■■■□□ 2.56
LRRC43Q8N309 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.01■■■□□ 2.55
LRRC43Q8N309 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
LRRC43Q8N309 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.95■■■□□ 2.55
LRRC43Q8N309 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
LRRC43Q8N309 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
LRRC43Q8N309 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.93■■■□□ 2.54
LRRC43Q8N309 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
LRRC43Q8N309 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.91■■■□□ 2.54
LRRC43Q8N309 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.9■■■□□ 2.54
LRRC43Q8N309 AC097358.2-201ENST00000607541 1159 ntBASIC30.9■■■□□ 2.54
LRRC43Q8N309 SETD8P1-201ENST00000623146 1180 ntBASIC30.9■■■□□ 2.54
LRRC43Q8N309 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
LRRC43Q8N309 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.85■■■□□ 2.53
LRRC43Q8N309 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
LRRC43Q8N309 AC136428.2-201ENST00000563187 214 ntBASIC30.83■■■□□ 2.53
LRRC43Q8N309 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.82■■■□□ 2.52
LRRC43Q8N309 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.81■■■□□ 2.52
LRRC43Q8N309 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
LRRC43Q8N309 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.77■■■□□ 2.52
LRRC43Q8N309 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
LRRC43Q8N309 AC145285.7-201ENST00000614819 1539 ntBASIC30.73■■■□□ 2.51
LRRC43Q8N309 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.68■■■□□ 2.5
LRRC43Q8N309 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
LRRC43Q8N309 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.66■■■□□ 2.5
LRRC43Q8N309 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.65■■■□□ 2.5
LRRC43Q8N309 SUZ12P1-203ENST00000578195 985 ntBASIC30.65■■■□□ 2.5
LRRC43Q8N309 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
LRRC43Q8N309 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
LRRC43Q8N309 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
LRRC43Q8N309 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LRRC43Q8N309 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.61■■■□□ 2.49
LRRC43Q8N309 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.6■■■□□ 2.49
LRRC43Q8N309 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
LRRC43Q8N309 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
LRRC43Q8N309 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
LRRC43Q8N309 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
LRRC43Q8N309 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LRRC43Q8N309 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.55■■■□□ 2.48
LRRC43Q8N309 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
LRRC43Q8N309 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.52■■■□□ 2.48
LRRC43Q8N309 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
LRRC43Q8N309 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
LRRC43Q8N309 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.49■■■□□ 2.47
LRRC43Q8N309 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LRRC43Q8N309 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
LRRC43Q8N309 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LRRC43Q8N309 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LRRC43Q8N309 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.45■■■□□ 2.47
LRRC43Q8N309 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
LRRC43Q8N309 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LRRC43Q8N309 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
LRRC43Q8N309 RPS2P35-201ENST00000443417 897 ntBASIC30.37■■■□□ 2.45
LRRC43Q8N309 CAHM-201ENST00000604200 896 ntBASIC30.36■■■□□ 2.45
LRRC43Q8N309 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
LRRC43Q8N309 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LRRC43Q8N309 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
LRRC43Q8N309 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
LRRC43Q8N309 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.34■■■□□ 2.45
LRRC43Q8N309 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
LRRC43Q8N309 AL133380.1-201ENST00000506013 324 ntBASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms