Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 AL031258.1-201ENST00000623562 325 ntBASIC30.83■■■□□ 2.53
DENND4AQ7Z401 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
DENND4AQ7Z401 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.78■■■□□ 2.52
DENND4AQ7Z401 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.75■■■□□ 2.51
DENND4AQ7Z401 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
DENND4AQ7Z401 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
DENND4AQ7Z401 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
DENND4AQ7Z401 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
DENND4AQ7Z401 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.7■■■□□ 2.5
DENND4AQ7Z401 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.69■■■□□ 2.5
DENND4AQ7Z401 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.66■■■□□ 2.5
DENND4AQ7Z401 RARRES2P7-201ENST00000567349 469 ntBASIC30.65■■■□□ 2.5
DENND4AQ7Z401 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
DENND4AQ7Z401 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.63■■■□□ 2.49
DENND4AQ7Z401 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.62■■■□□ 2.49
DENND4AQ7Z401 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.62■■■□□ 2.49
DENND4AQ7Z401 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.61■■■□□ 2.49
DENND4AQ7Z401 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
DENND4AQ7Z401 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.6■■■□□ 2.49
DENND4AQ7Z401 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
DENND4AQ7Z401 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.55■■■□□ 2.48
DENND4AQ7Z401 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
DENND4AQ7Z401 AC136428.2-201ENST00000563187 214 ntBASIC30.49■■■□□ 2.47
DENND4AQ7Z401 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
DENND4AQ7Z401 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
DENND4AQ7Z401 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
DENND4AQ7Z401 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.4■■■□□ 2.46
DENND4AQ7Z401 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
DENND4AQ7Z401 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.38■■■□□ 2.45
DENND4AQ7Z401 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.37■■■□□ 2.45
DENND4AQ7Z401 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
DENND4AQ7Z401 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
DENND4AQ7Z401 SUZ12P1-203ENST00000578195 985 ntBASIC30.33■■■□□ 2.45
DENND4AQ7Z401 SETD8P1-201ENST00000623146 1180 ntBASIC30.31■■■□□ 2.44
DENND4AQ7Z401 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
DENND4AQ7Z401 AC097358.2-201ENST00000607541 1159 ntBASIC30.29■■■□□ 2.44
DENND4AQ7Z401 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.44
DENND4AQ7Z401 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
DENND4AQ7Z401 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.23■■■□□ 2.43
DENND4AQ7Z401 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
DENND4AQ7Z401 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.23■■■□□ 2.43
DENND4AQ7Z401 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.22■■■□□ 2.43
DENND4AQ7Z401 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.22■■■□□ 2.43
DENND4AQ7Z401 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
DENND4AQ7Z401 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
DENND4AQ7Z401 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.17■■■□□ 2.42
DENND4AQ7Z401 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
DENND4AQ7Z401 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
DENND4AQ7Z401 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
DENND4AQ7Z401 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.11■■■□□ 2.41
DENND4AQ7Z401 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.1■■■□□ 2.41
DENND4AQ7Z401 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DENND4AQ7Z401 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.08■■■□□ 2.41
DENND4AQ7Z401 RPS2P35-201ENST00000443417 897 ntBASIC30.08■■■□□ 2.41
DENND4AQ7Z401 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.08■■■□□ 2.41
DENND4AQ7Z401 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.05■■■□□ 2.4
DENND4AQ7Z401 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
DENND4AQ7Z401 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
DENND4AQ7Z401 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
DENND4AQ7Z401 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
DENND4AQ7Z401 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.94■■■□□ 2.38
DENND4AQ7Z401 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
DENND4AQ7Z401 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
DENND4AQ7Z401 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
DENND4AQ7Z401 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.89■■■□□ 2.37
DENND4AQ7Z401 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.87■■■□□ 2.37
DENND4AQ7Z401 AL162393.1-201ENST00000437852 946 ntBASIC29.87■■■□□ 2.37
DENND4AQ7Z401 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
DENND4AQ7Z401 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
DENND4AQ7Z401 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.8■■■□□ 2.36
DENND4AQ7Z401 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
DENND4AQ7Z401 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
DENND4AQ7Z401 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
DENND4AQ7Z401 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.76■■■□□ 2.35
DENND4AQ7Z401 AC145285.7-201ENST00000614819 1539 ntBASIC29.76■■■□□ 2.35
DENND4AQ7Z401 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
DENND4AQ7Z401 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
DENND4AQ7Z401 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
DENND4AQ7Z401 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
DENND4AQ7Z401 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
DENND4AQ7Z401 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.72■■■□□ 2.35
DENND4AQ7Z401 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
DENND4AQ7Z401 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.68■■■□□ 2.34
DENND4AQ7Z401 CAHM-201ENST00000604200 896 ntBASIC29.67■■■□□ 2.34
DENND4AQ7Z401 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.65■■■□□ 2.34
DENND4AQ7Z401 AL391121.1-201ENST00000607967 1349 ntBASIC29.65■■■□□ 2.34
DENND4AQ7Z401 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
DENND4AQ7Z401 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
DENND4AQ7Z401 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.63■■■□□ 2.33
DENND4AQ7Z401 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
DENND4AQ7Z401 AL133380.1-201ENST00000506013 324 ntBASIC29.61■■■□□ 2.33
DENND4AQ7Z401 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.6■■■□□ 2.33
DENND4AQ7Z401 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
DENND4AQ7Z401 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
DENND4AQ7Z401 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
DENND4AQ7Z401 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
DENND4AQ7Z401 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
DENND4AQ7Z401 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
DENND4AQ7Z401 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.55■■■□□ 2.32
DENND4AQ7Z401 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms